Limnobacter profundi: HKT17_12865
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Entry
HKT17_12865 CDS
T06583
Name
(GenBank) type II secretion system F family protein
KO
K02653
type IV pilus assembly protein PilC
Organism
limn
Limnobacter profundi
Brite
KEGG Orthology (KO) [BR:
limn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
limn02044
]
HKT17_12865
02035 Bacterial motility proteins [BR:
limn02035
]
HKT17_12865
Secretion system [BR:
limn02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
HKT17_12865
Bacterial motility proteins [BR:
limn02035
]
Pilus system
Pilus assembly proteins
HKT17_12865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSF
DUF4234
Motif
Other DBs
NCBI-ProteinID:
QJR30526
UniProt:
A0ABX6N809
LinkDB
All DBs
Position
2750871..2752109
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AA seq
412 aa
AA seq
DB search
MNANLREKPPSGELLFLWTEKPKSKSQKARSGEIRARSIDHARYQLSRQGVKASSLRKAK
PYSGSKIPLVLVASFVRQLAVMIQSGVPLGQSLGLIAGGMTSKSKRAIQTVVRAIRADVE
SGLKLSDAMRKHPRCFDNLFCNTLAAGENAGELDAALGRLATHIEKTLRIRQKVRKAMIY
PSIVVLVAIGVTVGMLLFVLPSFKSIYSQFKAELPLLTTLLLKASDFLQEYGLILLAAVG
LGVYSLFQMYRRNQKFKNSMDILLLRMPLIGDLMKTAVHARWTRTFATLSASGVPITSAL
ESVASVSQIRSFQDATLEIRQAVASGGRVSDSMENSRLFPPESIQMIRIGEESGRMDSML
ERLANQYETNLDDKVDTLSTVMEPMIMCIIGILVGVLIVGMYMPIFNMGDIV
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcaaacctgagagagaaacccccttcaggggaactgctgtttttgtggacggaa
aaacccaaaagcaagtcacaaaaggcacggtccggcgagatccgggccaggtcaatcgac
catgcccgttaccagctcagccgacagggtgttaaagccagctcgcttcgaaaagcaaaa
ccttacagcggcagcaaaattccattggtcttggtggcctcttttgtcaggcaacttgcg
gtcatgatccagtcaggtgtaccgctggggcaaagcctcggtttgattgcgggcggcatg
accagcaaatccaaaagggccattcaaaccgtggtgagggccattcgcgctgatgtggaa
agtggtttgaaactcagcgatgccatgcggaaacacccccgctgtttcgacaacctgttt
tgcaacaccctggctgccggcgaaaatgcgggcgaactggacgccgcactgggacgactg
gccacccacattgaaaaaacgttgcgaattcgacaaaaagtgcgcaaggcaatgatttac
ccaagcattgtggtgcttgtcgccattggcgtcaccgtgggcatgttgctgtttgtattg
ccgtcgttcaagtctatttattcgcagttcaaggccgaactgcctttgctcaccaccctg
ttgctgaaagcctccgactttcttcaggaatatggattgattctgctggctgcagtgggc
ttgggcgtttacagcctgtttcagatgtaccgtcgaaatcaaaaattcaagaactcaatg
gacatactgctgttgcgcatgcctttgattggcgacctgatgaaaacagctgttcatgcc
cgttggacacgtactttcgcaacgttgagtgcatcgggtgtaccaatcacctctgcactg
gaatctgtggccagcgtgtcccaaattcgaagctttcaggacgccacacttgaaatacgg
caagccgttgcctcgggtggccgggtttccgatagcatggaaaatagtcggctgttcccg
ccggaatccatccagatgatccgcattggagaggaatcgggcaggatggactcgatgctt
gaacgactggccaaccaatatgaaaccaatctggacgacaaagtggatacactgtccacc
gtcatggagcccatgatcatgtgcattattggcatactggtgggcgtgctgatcgtgggc
atgtacatgccaatcttcaacatgggagatattgtttga
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