Limnobacter profundi: HKT17_12960
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Entry
HKT17_12960 CDS
T06583
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
limn
Limnobacter profundi
Pathway
limn00470
D-Amino acid metabolism
limn00550
Peptidoglycan biosynthesis
limn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
limn00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HKT17_12960
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HKT17_12960
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
limn01011
]
HKT17_12960
Enzymes [BR:
limn01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
HKT17_12960
Peptidoglycan biosynthesis and degradation proteins [BR:
limn01011
]
Precursor biosynthesis
Amino acid ligase
HKT17_12960
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Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
B12-binding
DUF2999
AAA_30
TRAF_BIRC3_bd
Motif
Other DBs
NCBI-ProteinID:
QJR30544
UniProt:
A0ABX6N802
LinkDB
All DBs
Position
complement(2771748..2773223)
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AA seq
491 aa
AA seq
DB search
MNLLLDQSVLQVGLGESGLACARWALAQGARLTVIDTRETPPGLQELQSIQPDVRVFNSV
GDLNWDFNRVVVSPGLPPSHPLMVGVLAQAAEHSTSVDSELDLFADALQALQQSRNYKPQ
VVGITGTNGKTTTTRMVECLAQFAGKKAVAAGNISPAALDALREQLEVDDLPDVWVLELS
SFQLHWTKRLKFDASTVLNITQDHLDWHPDMREYAEDKFRIFSENGVCVLNRDDELVAKV
NLPAGAEVITFGTSAPVHANDFGLIREGGMLWLAQLVGDQEVLTSTRRKKQEESEPSQKL
LMPTEALQVVGLHNASNALAALALCQGLGMPMAKLLHGLRSYQGEPHRVQHVVQIDGVDY
FDDSKGTNVGATVAALNGLAKPTVLIAGGDGKGQDFSPLIQPVSNYCKHVVLIGKDADNM
MSVLAGAHVPCEKASTLEQAVQVAASKAREGDCVLLSPACASLDMFRNYVHRAEVFVDAV
RAIAADRGQPC
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgcttcttgatcagtcggttttgcaagtcggactcggtgagtctggcttggct
tgcgcgcgctgggcgcttgcgcaaggcgcccggttgactgtgatcgacacgcgtgaaacg
cctccaggattgcaagagttgcaatccattcaacccgatgtgcgcgtgttcaattcggta
ggcgatttgaattgggacttcaaccgtgtggtggtgtcacctggtttgccgccttctcat
cctctgatggtcggggtgctcgcacaggctgcggaacattccacttccgttgattctgaa
cttgacctgtttgccgacgcacttcaggccttgcagcaaagtagaaactacaaaccgcaa
gtggtgggtattaccggaaccaatggaaaaaccaccacaactcgaatggtggaatgcctc
gcgcagttcgccgggaaaaaggctgttgcagcaggcaacatcagcccggctgctctggat
gctttgcgtgagcaattggaagtggatgatttacccgatgtttgggtgcttgagttgtcg
agtttccagttgcactggaccaagcgcttgaagtttgatgcatcgaccgtgctcaacatc
acgcaagaccatctggattggcaccccgacatgcgggagtacgccgaagacaagttccga
atcttttcggagaacggcgtgtgtgtgctgaaccgggatgatgaactcgtggccaaggtc
aatttgcctgctggagccgaggtgatcacctttggcacaagtgcccctgttcatgccaat
gactttggcctgattcgggagggcggtatgttgtggctggcgcaattggttggagaccaa
gaggtgctgacatccactcgccgcaaaaagcaggaggaatcagaacccagccaaaagctg
ttgatgccgaccgaggctttgcaagtagtgggcttgcacaatgcgagcaatgcgttggct
gctttggccttgtgtcaaggccttggtatgccaatggccaagttgttgcatgggttgcgc
agctaccagggcgagcctcaccgggtacagcacgttgtgcaaattgatggtgtcgattat
ttcgatgacagcaagggcaccaatgtaggggccactgtggcggcattgaacggtttggcc
aagcccaccgtgttgatcgccggcggcgacggaaaagggcaggacttctcgcccttgatt
cagcctgtatcgaattactgcaagcatgtggtgttgattggaaaagacgctgacaacatg
atgagtgtccttgccggtgcgcatgtgccctgcgaaaaagcaagtactttggagcaggct
gttcaagtggcggccagcaaggcccgtgagggcgactgtgtgttgctcagccctgcatgc
gcaagcctggacatgttcaggaattatgtgcatcgagctgaggtgtttgtggatgccgtt
cgagccattgcggccgacagggggcagccatgctag
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