Limnobacter profundi: HKT17_13330
Help
Entry
HKT17_13330 CDS
T06583
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
limn
Limnobacter profundi
Pathway
limn00061
Fatty acid biosynthesis
limn00071
Fatty acid degradation
limn01100
Metabolic pathways
limn01212
Fatty acid metabolism
limn02024
Quorum sensing
limn04146
Peroxisome
Module
limn_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
limn00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
HKT17_13330
00071 Fatty acid degradation
HKT17_13330
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
HKT17_13330
09145 Cellular community - prokaryotes
02024 Quorum sensing
HKT17_13330
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
limn01004
]
HKT17_13330
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
limn04147
]
HKT17_13330
Enzymes [BR:
limn01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
HKT17_13330
Lipid biosynthesis proteins [BR:
limn01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
HKT17_13330
Exosome [BR:
limn04147
]
Exosomal proteins
Exosomal proteins of breast milk
HKT17_13330
Exosomal proteins of breast cancer cells
HKT17_13330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Antimicrobial23
Motif
Other DBs
NCBI-ProteinID:
QJR30608
LinkDB
All DBs
Position
complement(2857591..2859360)
Genome browser
AA seq
589 aa
AA seq
DB search
MSARPDEAAPKVSPDQFNGFVSKEAQELFESHYWTKSYPPGVSGDMPPLRYTSMLELVAE
CLKKYADRPAFVSAGTEFSYKQVDDMSDQFAGYLKSIGVQAGDVVAIMLPNCVQFPVCFV
GAMKLGCTLTNVNPLYTVRELNHQLKDSGATTIVVFENFANTLQQSLEGTKVKNIVITQL
GDLLGGLKGLIVNFVMRKVKKMVPAYNLPQAVPIKKALAAGKGVSYPKPSPKLDDVALLQ
YTGGTTGVSKGAMLTQRNLMSNMEQGLAWMSEAIGKDPICVVTMLPLYHIYALAVNCMLF
MTFGARNILIANPRDVGTVMKVLRKEKFHVITAVNTLFNAFLNNEEFCKRDFSDMKFAMS
GGMALQQPIAERWYKVTGCAISEGFGMTETSPVVTVPPLHGGERPAFRGNVGLPIPGTEV
RLKRDDGLWAGLNEPGEICVRGPQVMLGYLNRPEETAKTIDKDGWLATGDIGTMDEQGFV
KIVDRKKDMIIVSGFNVFPNEIEDVVAQHPGVLECGVVGVPDPVTGEKVKLVVVKKDQSV
TKEDLIAHCRQNLTGYKIPSFVEFRDDLPKTPVGKILRRELRDKPKETA
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcacgtcccgacgaggccgcccctaaggtgtcgcccgatcaattcaatggtttt
gtcagcaaagaagcgcaggagctttttgagtctcattactggaccaaaagctaccctcca
ggcgtcagtggcgatatgcccccattgcgatacaccagcatgctggaactggtggccgaa
tgcctgaagaagtatgcagaccgccccgcgtttgtgtctgcgggcacggagttctcttac
aagcaagtcgacgatatgtcggaccagtttgcgggctacctgaaatcgattggtgttcaa
gcaggcgatgttgtggccattatgttgcccaactgtgtacagttccctgtgtgctttgtg
ggtgccatgaagctgggttgtactctgaccaacgtcaaccccctgtacaccgtgcgtgaa
ctgaatcaccagttgaaagactctggcgcaaccaccattgtggtgttcgagaactttgcc
aataccttgcagcagtcgctcgagggtaccaaggtcaagaacattgtgatcacgcagctg
ggcgatttgctgggtggcttgaagggcctgatcgtgaactttgtgatgcgcaaggtcaag
aaaatggtacctgcttacaacctgccacaagcggtgccgatcaagaaggccttggctgct
ggcaaaggtgtttcttatcccaagcccagccccaagctggacgatgtggctttgctgcaa
tacacgggtggtaccactggcgtttccaaaggcgccatgctgactcagcgcaacctgatg
agcaacatggagcagggcttggcctggatgagcgaagccattggcaaagacccgatttgt
gtggtcaccatgctgccgctttatcacatctacgcactggcggtgaactgcatgttgttc
atgacttttggtgcgcgcaacattctgattgccaacccacgtgatgtgggcactgtgatg
aaggtgctgcgcaaagaaaaattccatgtaatcactgcggtgaataccttgttcaatgct
ttcctgaacaacgaagaattctgcaaacgtgatttctccgacatgaagtttgcaatgagc
ggcggtatggctttgcaacagcctatcgctgagcgttggtacaaagtaaccggttgcgca
atttctgaaggcttcggcatgacagaaacttcgccagtggttacagtacccccgctgcat
ggcggcgagcgccctgcattccgcggcaacgtgggtttgcctattccgggcaccgaagtg
cgtttgaagcgtgacgatggcctgtgggctggtttgaatgaacctggtgaaatttgtgtg
cgtggtccacaagtgatgctgggttacttgaaccgccctgaagaaaccgccaaaacaatc
gacaaagacgggtggctggccacaggtgacattggcaccatggacgagcaaggcttcgtg
aaaattgtagaccgcaagaaagacatgattatcgtaagcggcttcaacgtgttccccaac
gaaattgaagacgtggttgcccagcacccaggcgtgctggaatgtggcgtggttggtgta
cccgacccagtgactggtgagaaagtgaaactggttgtggtgaagaaagaccagagcgtg
accaaggaagacttgattgcacactgccgccaaaacctgaccggttacaaaattccttca
tttgttgagttccgcgacgacttgcccaaaaccccagtgggcaagattctgcgccgtgaa
ctgcgcgacaagccgaaagagactgcgtaa
DBGET
integrated database retrieval system
