Limnobacter profundi: HKT17_13390
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Entry
HKT17_13390 CDS
T06583
Name
(GenBank) hypothetical protein
KO
K09800
translocation and assembly module TamB
Organism
limn
Limnobacter profundi
Brite
KEGG Orthology (KO) [BR:
limn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
limn02000
]
HKT17_13390
Transporters [BR:
limn02000
]
Other transporters
Pores ion channels [TC:
1
]
HKT17_13390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
QJR30619
LinkDB
All DBs
Position
complement(2874794..2878846)
Genome browser
AA seq
1350 aa
AA seq
DB search
MKRGFFAFCTLLLAAMVAATAGILWVVHSEQGLRFTVAQAQDWVNANTDQQLEFGRIQGT
LWQGFDLEFIRWQQEDTKVEAEQIQLVIDWSGALNRLIRITNLSAQVVRVDSPPSEDDTP
LVLPEKISLPVDLDLQNFSMRQLLVNGEELKQVYVKVSVQSEQLSVHNFSLSVRDTQVDS
TLEMTLAKPYQITGSMNAQRNLEDVLLNATLAATGSLERLELALDAKGENPERADQTQGV
QANAVLTLWGSTPFETVRINAENFDPSNWLDGAPRASLAIVATVEPNEDFSESIGNFSVR
NAQPSTVQSGGLPLAFMQTRFKLVLQNQLPEQLDLWVDQLQLADGKRQAGNASAVMQWRA
PKQPVDQVPTLDVLAGDVNFDVKTSNVDASVFATLPQRLALTSSIQGTKNGTQLRVDRLL
VRDRQAELRGKLHVDLLGKMPTDVQIELMKINPANYVPDASPFLQGDLNGKASFRGVLVQ
GGQAGTIDPLGDFNLDLVNSRLANAPLTLVAKATGGVSRLSNVLLDLDVVGNTVKAQGSY
GTQSDFVDLDVNLDELPRLGKLIQMPLSGTARLKGKLRGFDGNFSGEGNVDVRQLKLDDT
IQIETVSGQFNLGSAPDSPWVGDIVASQVKVPGAATNTLNELKLTLRGIRNQHELRGVFS
SGLQPFSRLRQLKGEFAFAGGIGVLRTSKSVSGWKGQLTQLKVEGMWLPARSFSLQAPAP
LVLAPGYVELADFVLKGEDTSVLNNRILRIANREIRVEGEMPQFYFPRMSPILRKQLTVE
PKDLIAKVNWTYLANPNKVDGRVNIRHVSGGLQILEDSQVDVDIRTLTANLDFNREAASV
DLNILADDFGAVTANLKLPVQQNPQTKAWEIAGDQAMQGSVAAGFTELNWLGPMISGGVR
TSGAGQVAMAIAGTANNPDVQGRLFAMDLDVFQLDQGVRFEDGNVVVDFTTDKASIDTFE
FTVYNRRPPRRYIEELGPLIQGNGKVKAEGVWNLTGLNGEIRLSMDRVPLLQRPDRWMMV
NSTVTVQQPSVEGQPLKIRGEVDTLGAYFEMPESGPQTLGDDVFIQGRSELAGQGLPIDL
QLRANLGERFYVNAEGLRSRLEGGLRLVMLEGVGGSGQRRSGRRLSATGTIQTVSGTYRA
YGQDLSIERGVVNFQGPLDNPGLNVRAVRKGVAVEAGVEVTGTAQRPKVSLVSEPAVPDS
EKLSWMILGRGSGSADRDSTLLLTAAAAIFGDEDESTTRKIAKSIGIDDLSLSTGSLTAA
DSRAVGSKVAIAPGADASANVIGSDDPLLSQRIVSLGKRFSDRVYLSFDQSVTTAASILK
LNYQYSRKLSFIARAGADNAVDVLYQFSFD
NT seq
4053 nt
NT seq
+upstream
nt +downstream
nt
ttgaagcgcggtttctttgccttttgtacattgctgctggcggccatggtggctgctaca
gccggaattttgtgggtggttcactcggaacaaggccttcggtttactgttgctcaagcg
caggactgggtgaatgccaatacggaccaacaacttgagtttggccgcattcagggcacg
ttgtggcaagggtttgacctggagtttattcgatggcagcaagaggacaccaaggttgaa
gctgagcaaattcagctggtaattgactggtcgggtgccttgaatcgattgattcgaatc
accaatttgtctgcacaggttgtgcgcgtcgattcaccgccttctgaagacgatacacct
ttggtattgccggaaaaaatcagcctgccagttgatctggatttgcagaatttcagcatg
cggcaattgttggtgaatggtgaagaattgaagcaggtgtatgtgaaggtttcggttcaa
tcggaacagctaagcgttcataatttttccttgagtgtgcgtgacacacaggtcgattcc
acactcgaaatgactttggcaaagccttatcaaatcactgggtctatgaatgcacagcgc
aatttggaggatgtgttactgaatgccacgctggcggcaacaggttccctggagcgcttg
gagcttgccctggatgccaaaggggaaaacccagaaagggcagatcaaacccagggtgtg
caagccaatgcggtgcttacgttgtggggttcaaccccatttgaaactgtgcgtataaac
gcggaaaattttgatccatccaattggctggatggggcaccgcgcgcctcgctagcgatt
gttgcaaccgttgagcccaatgaagatttctccgaaagtattggtaatttctcggttcgg
aatgcgcagccttcaactgttcagtctgggggtttgccactggctttcatgcaaacccgt
ttcaagttggttctacaaaatcaacttcccgaacaactcgatttgtgggtggatcagctt
cagttggccgatggaaaacgtcaggctggcaatgcgagcgctgtcatgcaatggcgcgcg
cccaagcagccggttgatcaagtgcccacgcttgatgtattggccggagacgtgaatttt
gatgtcaagacaagcaatgtagatgcgtcagtgtttgccactttgcctcaacgactcgca
ttgacatcctctattcaaggcactaaaaacggtacgcagttgcgggtagatcgccttttg
gttcgcgaccggcaagctgagcttcgcgggaagttgcatgtggatttgcttgggaaaatg
ccaactgacgttcagattgaattgatgaagatcaacccggccaactacgttccggatgcc
agtcctttcttgcaaggtgacttgaacgggaaggcctctttcaggggcgttctggttcag
ggcggacaggctggaacgattgatcctttgggtgacttcaatcttgatttggtgaattcc
cgtttggccaatgccccacttacactggttgcaaaagccactggcggcgtgtcgcgctta
agcaatgtgttgctggacctggacgtggtgggcaacacagtgaaagcccaagggagttac
ggaacacagtctgatttcgtggatttggatgtgaacctggatgagctgccgcgcctcgga
aaactgattcaaatgccactttcgggaacggcgcgattgaaaggaaagctgcgtggattt
gacggaaacttctcgggtgaaggcaatgtcgacgttcgccaattgaaactggatgacacc
attcaaatcgagacagtgtccggacagttcaaccttggttcggcgccagattcaccttgg
gttggtgacattgtggcgagccaagtgaaggtgcctggcgcggcaaccaacaccttgaat
gaattaaaactgacgcttcgaggcattcgcaatcagcatgagttacggggtgtgttttcc
agtggcttgcagccatttagccgcttgcgtcaattgaaaggcgagtttgcttttgcgggt
gggatcggtgttttgcgcacatcgaaatcggtttcaggctggaaaggacagcttacccaa
ctgaaagtggagggaatgtggttgcctgcccgcagcttttcacttcaggcaccggcacca
cttgttcttgcaccggggtatgtcgaacttgcagattttgttctcaaaggtgaagacacc
tcggtgttgaacaacagaattcttcgcattgcgaacagggagattcgggttgagggtgaa
atgccccagttttatttcccacgcatgtccccaatattgcgcaagcaattgacggtagag
cccaaagacctgatcgcgaaagtgaactggacctacctggccaatcccaacaaggtggat
ggtcgtgtgaatatccggcatgtgtcaggtggtttgcagattctggaggattcacaagtg
gacgtggatattcgaaccctgactgcaaatcttgactttaaccgagaggcggccagtgtg
gatttgaacattcttgctgacgatttcggtgcggtgactgcaaacttgaaattgccggtt
cagcagaatccgcaaaccaaagcttgggaaattgctggtgatcaagccatgcagggctct
gtggcagccggctttacagagcttaactggcttgggcccatgatcagcggtggggttaga
accagcggtgcaggccaggttgccatggcgattgcaggtactgcaaacaacccggatgtg
caggggcgtttgtttgcaatggatctggatgtgtttcagctggatcaaggggtacgcttt
gaagacggtaacgtggtggttgacttcaccaccgacaaggccagtatcgacacatttgaa
ttcacggtatacaaccgtcgcccgcctcggcgctacatcgaggagttgggtcctctcatc
cagggcaacgggaaagtgaaggcagagggtgtctggaatttgacaggtctgaatggtgaa
ataagactgtccatggacagggttcccttgttgcagcgccctgaccgatggatgatggtg
aactcgactgtcactgtgcagcaacccagtgtcgagggccaacccttaaaaattcggggg
gaagtggatacccttggcgcatattttgagatgcccgaaagtggtccacaaaccttgggc
gacgatgtgtttattcaggggcgcagtgaactggccgggcagggtttgccaattgatctg
cagttgcgcgccaatctgggcgaacgcttttacgtgaatgctgagggcttgcgaagtcga
cttgagggtggtttgcgtttggtgatgcttgaaggggtaggtggcagtgggcagcgccga
tcaggccggcgtttgagcgcaactggcaccattcaaacagtgagtggtacctaccgtgca
tacgggcaagacctgtcaatcgagcgcggcgtggttaatttccagggccctctggacaac
cctggactgaatgttcgtgcggtgcgcaaaggcgttgcagttgaagcgggtgttgaagtg
actggtacggcgcagcgacccaaggttagtctggtgagtgaaccggcagtccctgattct
gaaaagctgtcgtggatgatccttgggcgcggcagtggttcagcagatcgtgattccact
ttgttgctgacagcagctgcggcaatttttggtgatgaagacgaaagcaccacgcgcaaa
attgcgaaatcaatcgggattgatgatttgagtttaagtactggttccctgactgcagcg
gattcccgcgcagtgggcagcaaggtggctattgcgcccggtgcagatgcctctgcaaac
gtgattggatcggacgaccccttgctctcccagcgtattgtgtcgctgggaaagcgattc
agcgatcgtgtttacctgagttttgatcaatctgtaacaacggctgccagtattctgaaa
ttgaactatcaatactctcgcaagttgagtttcatcgcacgagccggtgcggacaatgca
gtggatgtgctttatcaattctcttttgactga
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