KEGG   Limnobacter profundi: HKT17_14695
Entry
HKT17_14695       CDS       T06583                                 
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
  KO
K11907  type VI secretion system protein VasG
Organism
limn  Limnobacter profundi
Pathway
limn03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:limn00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    HKT17_14695 (tssH)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:limn02044]
    HKT17_14695 (tssH)
Secretion system [BR:limn02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   HKT17_14695 (tssH)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA ClpB_D2-small AAA_5 AAA_22 AAA_16 Sigma54_activat AAA_14 Zeta_toxin AAA_7 nSTAND3 ATPase_2 TniB AAA_18 ResIII Hpr_kinase_C Dynamitin CbiA NACHT NBD_SMAX1 Torsin SRP54 Zn_ribbon_LysW SOGA Lzipper-MIP1
Other DBs
NCBI-ProteinID: QJR30861
LinkDB
Position
complement(3129409..3132075)
AA seq 888 aa
MSNISRVSLFAKLNPIAFKSVEGATVLCKLRGNPYVQLVHWVAQILQQDDSDWHHILRHF
ELDASAVLADVQRALERQPGGAQGISDLSEHVTNAVERAWVYGSLMFGAQKVRTGHVLVA
LLKTDFLLHELLKISPRFKQIPEAALSEQFAQLVANSAEQSLLTADVPPGALPGQASGAM
PAAQLGGEEALMRYTVDLTDKARKGEIDPVCGRELEVRQIVDILLRRRQNNPLITGEAGV
GKTAVVEGFALQVVAGDVPPALQGVRILTLDLGLLQAGASMKGEFEQRLRQVIDEIQASE
QSTILFIDEVHTLVGAGGNQGTGDAANLLKPALARGTLRTIGATTWAEYKKYIEKDPALT
RRFQVVQVDEPCEAKAIDMLRGLAAAMQAHHGVWLLDEAVQAAVRLSHRYIPARQLPDKA
ISLLDTACARVAVSQHATPARIESVQKRLTALRVERQAIEKEAAFGREHAARIGEIEEAS
IRLTEELEKLQSQWQEEKRVLDSLLTLRRDVDQTDANETSSGQALANLEQLKALECEIKA
LQGETPMIHPQVDAQCVAAVVADWTGIPVGRMVRNEIENVLNLSGALGARIVGQPHALET
IARRIQTSRAGLDDPNKPVGVFMLAGTSGVGKTETALALAENLYGGEHNVVTINMSEYQE
AHTVSSLKGAPPGYVGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVHELFFQVFDKGWM
EDGEGRRIDFRNTLILLTTNVGTPELMALCKAGLHAGEMPEPEELVKALRAPMLQVFPPA
LLGRLEVVPYYPLSSDMLANIVRLQLSRIQQRIASTHRMAVQIDPSVIERIVARCNEADS
GGRMVGTILSNTLLPTVSRQLLQATLLGKSVSTLSISTDGHEFTYQYD
NT seq 2667 nt   +upstreamnt  +downstreamnt
atgagcaatatcagccgtgtttcgctgtttgccaaattaaatcccattgcattcaaatcg
gttgaaggcgccactgtgctatgcaaactgcgaggcaatccctatgtgcaattggtgcac
tgggttgcacaaattcttcaacaagatgacagcgactggcatcacattcttcggcatttt
gagctggatgcaagcgccgtacttgccgacgtgcagcgcgcccttgagcgtcagcccggc
ggtgcgcaaggcatttccgatttgtcagagcatgtgaccaatgccgtagaaagggcgtgg
gtttatggctcactcatgtttggcgcacagaaagtacgcacgggtcatgtgttggttgcc
ttgttgaaaacagattttctgttgcatgaactgctgaaaatttcaccccgcttcaaacaa
attccggaggccgcgctaagtgaacagtttgcacaactggtggcaaactccgccgagcag
tctttgttgactgccgacgtgccaccgggtgcactgcccgggcaggccagcggagccatg
cctgctgcccagctgggcggtgaagaagccttgatgcgctacaccgtggacctgaccgac
aaagcgcgcaagggcgagatagacccggtgtgtggtcgtgaactggaggtgaggcagatt
gtcgatatattgctgcgccggcgccaaaacaaccccctgattaccggtgaagcgggtgtg
ggcaaaactgcggtggttgaagggtttgccttgcaggtggtggcaggtgatgtgccaccg
gcactgcaaggggtacgaatattaaccctcgacctgggtttgttgcaggccggtgcttcc
atgaaaggtgagttcgaacagcggctgcgccaggtgattgatgaaattcaggccagcgag
caaagcaccattttgttcatcgatgaggtgcacaccctggtgggggcaggtggaaaccag
ggcactggtgatgcagccaatttgctcaagcccgccttggcgcgtggcacgctcagaacc
ataggggcgacaacctgggcagagtacaaaaaatacatcgaaaaagacccggcactgacg
cggcgttttcaggtggtgcaggtggatgagccttgcgaggccaaggccatcgacatgctg
cgtggtttggccgcggccatgcaggcgcaccatggggtttggctgcttgatgaagcagtg
caggcggcggtgcgtttgtcacaccgttacattcccgcgcggcagttgccagacaaggcg
atcagtctgctcgacaccgcatgcgcacgcgtggctgtttcccagcacgctacacctgca
cgaatcgagtcggttcaaaagcggttgactgctttgcgtgttgagcgacaggcgattgaa
aaggaagcagcatttgggcgtgagcatgcagcacggattggtgaaattgaagaagcatcg
atcaggctgactgaggaattggagaagttgcaatcgcaatggcaagaggaaaagcgggta
ctggattccctgctgactttgcgccgtgacgttgatcaaacagatgccaatgaaactagc
agtgggcaggcattggccaatcttgagcaattgaaggcgctggaatgcgagatcaaggcg
ctgcaaggcgaaacacccatgattcacccacaggtggatgcgcagtgcgtggcggccgtg
gtggccgactggacgggtattcccgttgggcgcatggtgcgcaatgaaattgaaaacgtg
ctgaacctgagtggcgcgctgggtgcgcgcattgtgggccagccgcatgcgctggaaacc
attgcgcgtcgaattcaaaccagtcgcgccgggctggatgacccgaacaaaccggtgggt
gtgttcatgctggcgggcacttcgggcgtggggaaaactgaaactgctttggccctggcc
gagaacctgtacggcggcgagcacaatgtggtcaccatcaatatgagtgagtaccaggag
gcgcacacagtgtcttcactaaaaggcgcgccacccggttacgtggggtatggtgaaggc
ggtgtgttgaccgaggccgtgcgccgcaagccctacagtgtggtgttgctggatgaagtc
gagaaagcccaccccgatgtgcacgagctgttttttcaggtgtttgacaaaggctggatg
gaggacggcgaaggacgccgaattgattttcgcaacaccctgattttgttgaccacgaat
gtgggcacccctgaattaatggcgctttgcaaagcgggtttgcacgccggagaaatgcct
gaacccgaggaacttgtgaaggccctgcgtgcacccatgttgcaagtgtttccacctgcc
ttgttggggcggctggaagtggtgccgtattacccgctttccagtgacatgctggccaac
atcgttcgcttgcagttaagccgcattcagcaacgcattgcttctacacaccgaatggcg
gttcaaatcgacccttcggtgattgaacgcattgtggcccgttgcaacgaggctgactcg
ggcgggcgcatggtgggcaccattttgagcaacactttgttgcccacggtgagccgtcaa
ttgttgcaggccacgctgctgggcaaatcagtcagcacattgagtatcagcacagatggc
cacgagttcacgtatcagtacgactaa

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