Limnobacter profundi: HKT17_15070
Help
Entry
HKT17_15070 CDS
T06583
Name
(GenBank) deoxyribodipyrimidine photo-lyase/cryptochrome family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
limn
Limnobacter profundi
Brite
KEGG Orthology (KO) [BR:
limn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
limn03400
]
HKT17_15070
Enzymes [BR:
limn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
HKT17_15070
DNA repair and recombination proteins [BR:
limn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
HKT17_15070
Prokaryotic type
HKT17_15070
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
ESX-1_EspG
Motif
Other DBs
NCBI-ProteinID:
QJR30927
UniProt:
A0ABX6N927
LinkDB
All DBs
Position
complement(3208358..3209737)
Genome browser
AA seq
459 aa
AA seq
DB search
MQVLWFKRDLRLSDHLPLFEAMRNAKHHGLVLPLYIHEPSQIADAHTARQHQLFVHECLD
DLKQQFAQVGGYLHEELGEAVDVLARLHAQFKFTHVWAHQETTQLAQYRRDQAVAAWCKS
MGVALHELPQNNVQRATFMVNPFAEKINFQTYLDRAAQEEIKNPAGRNLQAFFAPQPAVE
LNRATVPLAAGDDKPLRMIGGRAQARAVAAKFFTPAKLRSYPFSISSPLKAWSGCSRLSP
YLAYGVVSDREVLQKLNALVNRVHGQGDATHIAKVEDAARFYVDRLIWRQGYLQQLENHT
GLETDAFYCDEPAEVNEEFLNAWQQGRTGFAYVDACQRFLQQTGWLNMRARATLVSFACV
QLGLPWQPVALFLAQQFLDFEPAIHYGQVRIASGTSHFSQMLVYDPLKQQAEQDPKGEFV
KRWLPEHGTANYPAPIVDNAESLKLGKARLHAMRQSRLD
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtgttgtggttcaaacgggatttgcgtttaagcgaccacctgccgctgtttgaa
gccatgcgcaatgccaagcatcacgggcttgtgctgcccttgtacattcacgaacccagc
caaattgcagatgcgcacaccgcgcgccaacaccagttgtttgtgcatgaatgcctggat
gatttgaagcagcagtttgcacaggtgggtggttatttgcatgaggaattgggcgaggcg
gtggatgtgttggcccgcctgcatgcacagttcaaattcacccacgtgtgggcgcaccag
gaaaccacgcagcttgcacaataccgacgcgatcaggccgtggcggcgtggtgcaaaagc
atgggtgtggcgcttcatgaattgccccaaaacaatgtgcagcgtgccaccttcatggtc
aatccgtttgctgaaaaaattaattttcaaacttacctggatcgggccgcccaagaagaa
atcaaaaacccggccgggcgaaatttgcaggccttcttcgcaccccaacccgctgttgaa
ctcaaccgtgccactgtgccgctggctgcgggcgatgacaaaccattgcgcatgataggt
ggccgtgcgcaggcccgggcagtggccgcgaaattttttacacccgccaagttgagaagt
tatcccttctcaatttccagccctttgaaagcatggagtggttgttcacgcctgtcgcct
tatctggcttatggtgtagtgagcgaccgcgaggtgctgcaaaaactcaatgccttggtg
aacagggtgcatgggcagggtgatgcgacacacattgcaaaagttgaagatgctgcgcgg
ttttatgtggacaggctgatttggcggcaaggttatttgcagcagctggagaaccacacg
ggtttggaaaccgatgctttttactgcgatgaacctgcggaagtgaatgaggaattcttg
aatgcctggcagcagggccgaacaggctttgcctatgtggatgcctgccagcgctttttg
caacaaacaggttggctgaacatgcgggcgcgggccacgctggtgtcgtttgcgtgcgtg
caattgggtttgccctggcaacccgtggccttgtttttggcacagcagtttctcgacttc
gagcccgccattcactatggtcaggtgcgcattgcaagtggcaccagccacttttcgcaa
atgctggtgtatgaccccttgaaacaacaggccgagcaagaccccaaaggcgagtttgtg
aagcgctggttgccggaacatggcactgccaattacccagcgcctatcgtcgacaatgcg
gaatcgttaaagctgggcaaggcgcgcttgcatgccatgcgccagagccggctcgattaa
DBGET
integrated database retrieval system
