Limnobacter profundi: HKT17_15245
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Entry
HKT17_15245 CDS
T06583
Name
(GenBank) LysR family transcriptional regulator
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
limn
Limnobacter profundi
Brite
KEGG Orthology (KO) [BR:
limn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
limn03000
]
HKT17_15245
Transcription factors [BR:
limn03000
]
Prokaryotic type
Helix-turn-helix
LysR family
HKT17_15245
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
DUF2802
Motif
Other DBs
NCBI-ProteinID:
QJR30961
LinkDB
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Position
complement(3250532..3251404)
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AA seq
290 aa
AA seq
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MMNYRHLHYFWMVAKEGGFARAAERMDMAIQTISAQVRELEKDLGHQLLKPDGRGVALTE
AGQVAFAKAEEIFQLGQSLPELVRAVASKPVKRFRVGLCDGISKLAVHALLKPVLDTEDL
HLTCHEGEPEQLLAELALHHLDFVFAGQPPPANPNLRMQSRVLNTTTVDWFGASRWVKKS
SVNNFPQCLAELPVLLPTGHSRLRIDLNYWFEQQGIVPHVVGEFEDSALMSVFAARGLGV
FPVSRLGVYDAGTLSGLRLLGQCPDLHEEIHGVWNLKGIDHPLVVELLKA
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgatgaactaccgccacttgcattacttctggatggtcgccaaagaaggtggttttgca
cgtgctgccgagcgaatggacatggccattcaaaccatcagcgcgcaggtgcgcgaactt
gaaaaagacttggggcatcagttgctaaagccggatgggcgtggcgtggcattgactgaa
gccgggcaggtggcctttgccaaagccgaggaaatttttcaactgggccaaagcctgccg
gagttggtacgggcggtggccagcaaaccggtgaagcgtttccgggtgggtttgtgcgat
ggcatctcgaaactggcggtgcatgccttgttgaagcctgtgttggatacggaagacctg
cacctgacttgccatgaaggcgaacccgagcagttgctggcggagttggctttgcaccac
cttgattttgtgtttgccgggcagcccccgccagccaaccccaacttgcgcatgcaaagc
cgggtgctgaatacaaccacggtggattggttcggcgcttcgaggtgggtgaaaaaaagc
agtgtgaacaattttccacaatgcctggctgaattgccggtgttactgcccactggacat
tcccgcttgcggatagacttgaattactggtttgagcagcagggaattgtgccccatgtg
gtgggcgaatttgaagacagtgccttgatgtcggtgtttgcagcccgtggcctgggtgtg
tttccagtgagccgtttgggtgtgtacgacgcgggtaccttaagcggtttgcgtctgctg
gggcaatgccctgatttgcacgaggaaattcatggcgtgtggaatttgaagggaatcgac
caccctttggtggtcgaattgttgaaagcttaa
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