KEGG   PATHWAY: limt03010
Entry
limt03010                   Pathway                                
Name
Ribosome - Limnohabitans sp. TEGF004
Class
Genetic Information Processing; Translation
Pathway map
limt03010  Ribosome
limt03010

Other DBs
PDB: 1FFK 1J5E 4V4A 4YBB 4V6U 4V6X 4UG0 4V88 3A1Y
Organism
Limnohabitans sp. TEGF004 [GN:limt]
Gene
LTEGF4_01270  rpsL; 30S ribosomal protein S12 [KO:K02950]
LTEGF4_01280  rpsG; 30S ribosomal protein S7 [KO:K02992]
LTEGF4_01310  rpsJ; 30S ribosomal protein S10 [KO:K02946]
LTEGF4_01320  rplC; 50S ribosomal protein L3 [KO:K02906]
LTEGF4_01330  rplD; 50S ribosomal protein L4 [KO:K02926]
LTEGF4_01340  rplW; 50S ribosomal protein L23 [KO:K02892]
LTEGF4_01350  rplB; 50S ribosomal protein L2 [KO:K02886]
LTEGF4_01360  rpsS; 30S ribosomal protein S19 [KO:K02965]
LTEGF4_01370  rplV; 50S ribosomal protein L22 [KO:K02890]
LTEGF4_01380  rpsC; 30S ribosomal protein S3 [KO:K02982]
LTEGF4_01390  rplP; 50S ribosomal protein L16 [KO:K02878]
LTEGF4_01400  rpmC; 50S ribosomal protein L29 [KO:K02904]
LTEGF4_01410  rpsQ; 30S ribosomal protein S17 [KO:K02961]
LTEGF4_01980  rplN; 50S ribosomal protein L14 [KO:K02874]
LTEGF4_01990  rplX; 50S ribosomal protein L24 [KO:K02895]
LTEGF4_02000  rplE; 50S ribosomal protein L5 [KO:K02931]
LTEGF4_02010  rpsN; 30S ribosomal protein S14 [KO:K02954]
LTEGF4_02020  rpsH; 30S ribosomal protein S8 [KO:K02994]
LTEGF4_02030  rplF; 50S ribosomal protein L6 [KO:K02933]
LTEGF4_02040  rplR; 50S ribosomal protein L18 [KO:K02881]
LTEGF4_02050  rpsE; 30S ribosomal protein S5 [KO:K02988]
LTEGF4_02060  rpmD; 50S ribosomal protein L30 [KO:K02907]
LTEGF4_02070  rplO; 50S ribosomal protein L15 [KO:K02876]
LTEGF4_02090  rpsM; 30S ribosomal protein S13 [KO:K02952]
LTEGF4_02100  rpsK; 30S ribosomal protein S11 [KO:K02948]
LTEGF4_02110  rpsD; 30S ribosomal protein S4 [KO:K02986]
LTEGF4_02130  rplQ; 50S ribosomal protein L17 [KO:K02879]
LTEGF4_07070  rpsU3; 30S ribosomal protein S21 3 [KO:K02970]
LTEGF4_07160  rpsO; 30S ribosomal protein S15 [KO:K02956]
LTEGF4_08690  rpsF; 30S ribosomal protein S6 [KO:K02990]
LTEGF4_08710  rpsR; 30S ribosomal protein S18 [KO:K02963]
LTEGF4_08720  rplI; 50S ribosomal protein L9 [KO:K02939]
LTEGF4_08960  rpmI; 50S ribosomal protein L35 [KO:K02916]
LTEGF4_08970  rplT; 50S ribosomal protein L20 [KO:K02887]
LTEGF4_10100  rpsB; 30S ribosomal protein S2 [KO:K02967]
LTEGF4_10360  rpmE2; 50S ribosomal protein L31 type B [KO:K02909]
LTEGF4_17520  rpsA; 30S ribosomal protein S1 [KO:K02945]
LTEGF4_18210  rplS; 50S ribosomal protein L19 [KO:K02884]
LTEGF4_18240  rpsP; 30S ribosomal protein S16 [KO:K02959]
LTEGF4_18370  rpsT; 30S ribosomal protein S20 [KO:K02968]
LTEGF4_18900  rplY; 50S ribosomal protein L25 [KO:K02897]
LTEGF4_20170  rpmF; 50S ribosomal protein L32 [KO:K02911]
LTEGF4_20740  rpmB; 50S ribosomal protein L28 [KO:K02902]
LTEGF4_20750  rpmG; 50S ribosomal protein L33 [KO:K02913]
LTEGF4_21960  rpmA; 50S ribosomal protein L27 [KO:K02899]
LTEGF4_21970  rplU; 50S ribosomal protein L21 [KO:K02888]
LTEGF4_22890  rpsI; 30S ribosomal protein S9 [KO:K02996]
LTEGF4_22900  rplM; 50S ribosomal protein L13 [KO:K02871]
LTEGF4_23540  rplL; 50S ribosomal protein L7/L12 [KO:K02935]
LTEGF4_23550  rplJ; 50S ribosomal protein L10 [KO:K02864]
LTEGF4_23560  rplA; 50S ribosomal protein L1 [KO:K02863]
LTEGF4_23570  rplK; 50S ribosomal protein L11 [KO:K02867]
LTEGF4_25440  rpmH; 50S ribosomal protein L34 [KO:K02914]
LTEGF4_r00010  [KO:K01985]
LTEGF4_r00020  [KO:K01980]
LTEGF4_r00030  [KO:K01977]
LTEGF4_r00040  [KO:K01985]
LTEGF4_r00050  [KO:K01980]
LTEGF4_r00060  [KO:K01977]
Reference
  Authors
Ban N, Nissen P, Hansen J, Capel M, Moore PB, Steitz TA.
  Title
Placement of protein and RNA structures into a 5 A-resolution map of the 50S ribosomal subunit.
  Journal
Nature 400:841-847 (1999)
DOI:10.1038/23641
Reference
  Authors
Clemons WM Jr, May JL, Wimberly BT, McCutcheon JP, Capel MS, Ramakrishnan V.
  Title
Structure of a bacterial 30S ribosomal subunit at 5.5 A resolution.
  Journal
Nature 400:833-840 (1999)
DOI:10.1038/23631
Reference
  Authors
Cate JH, Yusupov MM, Yusupova GZ, Earnest TN, Noller HF.
  Title
X-ray crystal structures of 70S ribosome functional complexes.
  Journal
Science 285:2095-2104 (1999)
DOI:10.1126/science.285.5436.2095
Reference
  Authors
Ban N, Nissen P, Hansen J, Moore PB, Steitz TA.
  Title
The complete atomic structure of the large ribosomal subunit at 2.4 A resolution.
  Journal
Science 289:905-920 (2000)
DOI:10.1126/science.289.5481.905
Reference
  Authors
Nissen P, Hansen J, Ban N, Moore PB, Steitz TA.
  Title
The structural basis of ribosome activity in peptide bond synthesis.
  Journal
Science 289:920-930 (2000)
DOI:10.1126/science.289.5481.920
Reference
  Authors
Wimberly BT, Brodersen DE, Clemons WM Jr, Morgan-Warren RJ, Carter AP, Vonrhein C, Hartsch T, Ramakrishnan V.
  Title
Structure of the 30S ribosomal subunit.
  Journal
Nature 407:327-339 (2000)
DOI:10.1038/35030006
Reference
  Authors
Carter AP, Clemons WM, Brodersen DE, Morgan-Warren RJ, Wimberly BT, Ramakrishnan V.
  Title
Functional insights from the structure of the 30S ribosomal subunit and its interactions with antibiotics.
  Journal
Nature 407:340-348 (2000)
DOI:10.1038/35030019
Reference
  Authors
Noeske J, Wasserman MR, Terry DS, Altman RB, Blanchard SC, Cate JH
  Title
High-resolution structure of the Escherichia coli ribosome.
  Journal
Nat Struct Mol Biol 22:336-41 (2015)
DOI:10.1038/nsmb.2994
Reference
  Authors
Armache JP, Anger AM, Marquez V, Franckenberg S, Frohlich T, Villa E, Berninghausen O, Thomm M, Arnold GJ, Beckmann R, Wilson DN
  Title
Promiscuous behaviour of archaeal ribosomal proteins: implications for eukaryotic ribosome evolution.
  Journal
Nucleic Acids Res 41:1284-93 (2013)
DOI:10.1093/nar/gks1259
Reference
  Authors
Anger AM, Armache JP, Berninghausen O, Habeck M, Subklewe M, Wilson DN, Beckmann R
  Title
Structures of the human and Drosophila 80S ribosome.
  Journal
Nature 497:80-5 (2013)
DOI:10.1038/nature12104
Reference
  Authors
Khatter H, Myasnikov AG, Natchiar SK, Klaholz BP
  Title
Structure of the human 80S ribosome.
  Journal
Nature 520:640-5 (2015)
DOI:10.1038/nature14427
Reference
  Authors
Naganuma T, Nomura N, Yao M, Mochizuki M, Uchiumi T, Tanaka I
  Title
Structural basis for translation factor recruitment to the eukaryotic/archaeal ribosomes.
  Journal
J Biol Chem 285:4747-56 (2010)
DOI:10.1074/jbc.M109.068098
KO pathway
ko03010   

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