Limnohabitans sp. TEGF004: LTEGF4_01060
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Entry
LTEGF4_01060 CDS
T11140
Symbol
gatB
Name
(GenBank) aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B
KO
K02434
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:
6.3.5.6
6.3.5.7
]
Organism
limt Limnohabitans sp. TEGF004
Pathway
limt00970
Aminoacyl-tRNA biosynthesis
limt01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
limt00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LTEGF4_01060 (gatB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
limt03029
]
LTEGF4_01060 (gatB)
Enzymes [BR:
limt01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
LTEGF4_01060 (gatB)
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
LTEGF4_01060 (gatB)
Mitochondrial biogenesis [BR:
limt03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
LTEGF4_01060 (gatB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GatB_N
GatB_Yqey
Motif
Other DBs
NCBI-ProteinID:
BDU54425
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All DBs
Position
complement(106935..108410)
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AA seq
491 aa
AA seq
DB search
MTAPKLVQGYEVVIGFETHAQLSTKSKIFSRASVAFGAEPNTQACAVDMALPGTLPVMNI
GAVERAIEFGLGVNAHIAERSIFARKNYFYPDLPKGYQISQFEIPVVQGGEVSFFLEVGK
ETVHKTVRLERAHLEEDAGKSLHEDFIGQSGIDLNRAGTPLLEIVTQPDMRSSEEAVAYA
KELHKIVTWIGICDGNMQEGSFRCDANVSVRKPGAPLGTRREIKNLNSFKFMQQAIDYEV
RWQIDQIEDGHDIEQATVLFDPDTGETRAMRTKEDAADYRYFPDPDLPPLVIGRDWVERV
RSEMAELPRVMAERFVRDYALPEYDATQLTQSKATAAYFEATAKACGQAKLASNWIMGEV
SRRLNSGEVTFDNIPVSAAQLGALISRISDNTISNSAARQVFDGLWNKEGPSGSEGDVDA
IIEAKGLKQINDTGALEAIIDEVLAANPKNVEEFKAGNAKALNGLVGPIMKASKGKANPA
QVNELLMKKLG
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgactgcacccaaattagttcaaggctacgaagtcgtcatcggctttgaaacacacgca
cagctctccaccaagagcaaaattttcagccgtgcctcagtggcgttcggcgcagagccc
aacacgcaagcttgcgcggtggacatggccctgcccggcactttgcccgtgatgaacatc
ggcgcagtcgaacgcgccattgagtttggtttgggtgtcaatgcacacattgccgagcgc
agcatctttgcgcgcaaaaactacttctaccccgacctgcccaagggctaccaaatcagc
cagtttgaaattccggtggtacaaggcggcgaagtctcgttcttcttggaagttggcaaa
gaaaccgtgcacaaaactgtgcgtttggaacgtgcccacctcgaagaagatgcaggcaaa
tcgctgcatgaagatttcattggtcagagtggcatcgacttgaaccgagctggcacaccg
ctgctagaaatcgtgacacagcccgacatgcgcagcagcgaagaagccgtggcctatgcc
aaagagctgcacaaaatcgtcacgtggattggcatttgcgacggcaacatgcaagaaggc
tcgttccgctgcgacgccaacgtgtcggtgcgcaaacccggcgcacctttgggcacccgc
cgtgaaatcaaaaacttgaacagcttcaagttcatgcaacaagccatcgactacgaagtg
cgctggcaaatcgaccaaatcgaagacggccatgacatcgaacaagccaccgtgttgttc
gacccagacactggcgaaacccgcgccatgcgcaccaaagaagacgccgccgactaccgc
tacttccccgacccagacctgccacccttggtgattggtcgcgattgggtggagcgtgtg
agaagcgaaatggccgagctgccacgtgtcatggccgagcgttttgtgcgcgactacgcg
ctgcccgaatacgatgcgacgcagctgacccaaagcaaggccacagccgcctactttgaa
gccacggcgaaagcctgcggtcaagccaaactggccagcaactggatcatgggcgaagtg
tcacgccgcttgaacagcggcgaggtgacgtttgacaacatccccgtcagcgcggcgcaa
ctgggcgcgttgatcagccgcatcagcgacaacaccatcagcaacagcgctgcgcgtcag
gtgtttgacggtctgtggaataaagaaggcccctccggtagcgaaggcgatgtcgacgcc
atcatcgaagccaaaggcctcaaacaaatcaacgacacgggcgcgttggaagccatcatt
gacgaagtactggccgccaaccccaagaacgtggaagagttcaaagcgggcaatgccaaa
gccttgaacggtttggtcggccccatcatgaaggccagcaaaggcaaagccaaccccgca
caagtcaacgagctgttgatgaagaaactggggtaa
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