Limnohabitans sp. TEGF004: LTEGF4_03730
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Entry
LTEGF4_03730 CDS
T11140
Name
(GenBank) hypothetical protein
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
limt Limnohabitans sp. TEGF004
Pathway
limt00470
D-Amino acid metabolism
limt00550
Peptidoglycan biosynthesis
limt01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
limt00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LTEGF4_03730
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LTEGF4_03730
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
limt01011
]
LTEGF4_03730
Enzymes [BR:
limt01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
LTEGF4_03730
Peptidoglycan biosynthesis and degradation proteins [BR:
limt01011
]
Precursor biosynthesis
Amino acid ligase
LTEGF4_03730
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
2-Hacid_dh_C
Pyr_redox
Oxidored_nitro
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
BDU54692
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Position
347982..349874
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AA seq
630 aa
AA seq
DB search
MQQLHNQSVLILGLGDSGLAMARWCSRFGAQVQVVDTRAEPPHLAALRAELPSVKFVHGA
FDANLVEGQDVRAVFKSPGLSPESVAPVWNAAVAAGLWVGTELTLFAQALTDLQTSMAYH
PKVLAITGTNGKTTVTSLTGQLLERAGKRVAVAGNIGPTLLDTLSQALDKAAEQQTAADA
IAAQEAAELAADEAAAEQARAVAEAKEKAAAAQAAQMALDAEEAMAQEAAAETDAASQMA
LTGTEADQAKDQATEQSEEAAQVTAADDEPYEVDLPPLVPPPPPPADHPFLPQVWVLELS
SFQLDGVDNFEPTAASVLNLTQDHLDWHGSMDGYGAAKARIFGKRGVLVLNREDAGVMVM
LDSAPIEVAEVVAKPSRAKTPKTQQRAHLTFGGDMPQRPGDYGIETVNGMTWLVRALEAD
ETRKRKKDDEEEIHFQRLMPADALRIRGRHNALNALAALALAGSAGGDLAPMLFGLREYQ
GEPHRVEPVSVLNGVEYFDDSKGTNVGATVAALHGLGVDRRLVVILGGDGKGQDFAPLSE
PVSRYARAVVLIGRDAPTLREVLQHSGVKLLDAATLEEAVNLCSEQAHSGDAVLLSPACA
SMDMFRNYAHRAEVFVNAVNHLVKEAGGMV
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaactccacaaccaatcagtgctgattctgggtctgggtgattccggcctggcc
atggcgcgttggtgctcgcgctttggcgcgcaagtgcaagtcgtggacacacgcgccgag
ccgccgcatttggcggcgttgcgtgctgagttgccaagtgtcaaatttgtgcatggcgca
tttgacgctaacttggtcgaaggccaagacgtgcgcgccgtgttcaagagcccaggtctg
agccctgagtctgtggcccctgtgtggaatgccgcagttgctgccggtttatgggtaggg
acagagttgaccctgttcgcccaagccctgactgatttgcaaaccagcatggcctatcac
cccaaggtgttggccatcaccggtaccaatggcaaaaccaccgtcacctcgttgaccggt
cagttgttagaacgtgcaggtaagcgcgtggcagtggctggcaatattggccctaccttg
ctcgacaccttgtcgcaagcgctggacaaagccgctgaacagcaaactgctgcagatgcg
attgccgcgcaagaagctgccgagttggctgcggatgaagctgcggctgaacaagcacgc
gcagttgcagaggccaaagaaaaagcggcggcagcacaagctgcacaaatggctttggat
gctgaagaggccatggcgcaagaagcggcagctgaaacagacgcagcatcacaaatggca
ctgacaggcacagaggctgaccaagcaaaagaccaagcaacagaacaaagcgaagaagcc
gcgcaagtgacggcagccgatgacgagccctacgaagtggacctgccacctttggtgccg
ccacctccgccccctgctgaccatccgttcctgccacaagtgtgggtgttggagttgtcg
agcttccagttggatggcgtggacaatttcgaacccactgcggcctcggtgctcaacctc
acacaagaccacctcgactggcacggcagcatggacggctatggcgcagcgaaagcgcgc
atctttggcaagcgtggcgtgctggtgctcaaccgtgaagatgcaggtgtgatggtcatg
ttggacagtgcacccattgaggtggcagaagttgtggccaagccctcgcgtgccaagacg
cccaaaacacagcaacgcgcccacctcacgtttggtggcgacatgccgcaacgccctggc
gactacggcattgaaactgtcaatggcatgacctggttggtgcgtgcgctagaagctgac
gaaacacgtaagcgcaaaaaagacgacgaagaagaaattcacttccaacgcctcatgcct
gctgatgcactgcgcatccgtggtcgccacaacgcgctcaacgccttggcggcgttggct
ttggccggtagcgcgggtggtgatttggcgcccatgttgtttggcttgcgtgagtaccaa
ggtgagccacaccgtgtggagcctgtgagtgtgctcaatggcgtggaatatttcgacgac
agcaaaggcaccaacgtgggcgccactgtggccgcgttgcatggcctcggtgtggaccgc
cgcttggttgtcatcttgggcggtgatggcaaaggacaagactttgcgcctttgagcgag
cccgtgtcgcgctacgcacgtgccgtggtgttgattggccgcgatgcccccacattgcgc
gaggtgttgcagcacagcggcgtcaagctactggatgccgccaccttagaagaggctgtt
aatttgtgtagcgaacaagcccattcaggtgacgccgtgttgttgtcgcccgcttgcgcg
agcatggacatgttccgcaactatgcgcatcgtgctgaagtgtttgtgaatgcggtgaac
catttggtgaaagaagcaggaggcatggtatga
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