Limnohabitans sp. TEGF004: LTEGF4_04190
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Entry
LTEGF4_04190 CDS
T11140
Symbol
fliA
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
limt Limnohabitans sp. TEGF004
Pathway
limt02020
Two-component system
limt02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
limt00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LTEGF4_04190 (fliA)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LTEGF4_04190 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
limt03021
]
LTEGF4_04190 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
limt02035
]
LTEGF4_04190 (fliA)
Transcription machinery [BR:
limt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LTEGF4_04190 (fliA)
Bacterial motility proteins [BR:
limt02035
]
Flagellar system
Flagellar assembly proteins
Stator
LTEGF4_04190 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_10
HNH_repeat
UPF0122
GerE
HTH_23
MarR_2
PhyR_sigma-like
DUF7343
KORA
SatD
Rv2175c_wHTH
Motif
Other DBs
NCBI-ProteinID:
BDU54738
LinkDB
All DBs
Position
398334..399092
Genome browser
AA seq
252 aa
AA seq
DB search
MRALTPAEMYGSCKPKGEDLVMAHLGLVKRVALHLKARIPAFMELDELIQVGMIGLLEAS
RAFDPVKGIEFENFAHSRVRGAMLDEVRRLSFLPRSAVAFNKEHNTTVHALAAELGRTPT
QAEIAEYMGKDLEEFHKERGKAKRFETYSMEVVTEEVMTIADDSSQQPEVIVEEAQFMDA
VTDAIAQLPEREQLVMQLYYVEEFNLKEIGETLGVSESRVSQILSSVVKKLRGTLKVDNA
AETEKVETRRRA
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgagagccctcacccccgccgaaatgtatggctcttgcaagcccaagggcgaagatttg
gtcatggcccatttgggcctggtcaaacgcgtggccttgcacttgaaagcccgtatccct
gccttcatggagctcgatgagctgattcaagtgggcatgattggcctgctcgaagcttcg
cgtgcgtttgatcctgtcaaaggcattgagtttgaaaacttcgcccacagccgtgtgcgc
ggcgccatgttggatgaagtgcgacgcttgtcgttcttgccccgctcagctgtggctttc
aacaaagaacacaacaccacggtgcacgctttggcggctgagttgggccgtacgcctacg
caagctgaaattgccgagtacatgggcaaagacctagaagagttccacaaagagcgcggc
aaagccaaacgcttcgagacctattccatggaagtggtcaccgaagaggtgatgaccatc
gctgacgacagctcgcaacaacctgaagtgatcgtggaagaagcgcagttcatggatgcc
gtgaccgacgccattgcacagttgcccgagcgcgagcagttggtcatgcagctttactac
gtggaagagttcaacctcaaagagattggcgaaaccttgggtgtgagcgaatcacgcgtg
agccaaattttgtcttcagtggtcaaaaagctgcgcggcaccttgaaggtggacaacgcg
gccgaaaccgagaaggttgaaaccaggagacgcgcatga
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