Limnohabitans sp. TEGF004: LTEGF4_05420
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Entry
LTEGF4_05420 CDS
T11140
Symbol
basR
Name
(GenBank) DNA-binding response regulator
KO
K07666
two-component system, OmpR family, response regulator QseB
Organism
limt Limnohabitans sp. TEGF004
Pathway
limt02020
Two-component system
limt02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
limt00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LTEGF4_05420 (basR)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LTEGF4_05420 (basR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
limt02022
]
LTEGF4_05420 (basR)
Two-component system [BR:
limt02022
]
OmpR family
QseC-QseB (quorum sensing)
LTEGF4_05420 (basR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
OKR_DC_1_N
Motif
Other DBs
NCBI-ProteinID:
BDU54861
LinkDB
All DBs
Position
545694..546383
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AA seq
229 aa
AA seq
DB search
MRILLIEDDAVLQAVMLRSLGDAGHRVDAASHLEEAAHFWQVQAYDAVLLDLNLPLNGQA
HAAQGSGLQLLREARARGDRTPVLVLTARNRTDERIAGLDAGADDYLGKPFDLEEVEARL
RALVRRTQGVDDEVQVGQLRLHRKLRRIFVNDADLALPAREFEVLCELMTPPGRAVSKRV
LSDKLSGFDEALGDNALEAFISRLRKKLADSGACIRTLRGIGYVLEEQP
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
gtgcgaatcttgttgattgaagacgatgccgtgctgcaagcggtcatgctgcgcagccta
ggcgatgcgggccaccgcgtggacgccgccagccatttggaagaagctgcacacttttgg
caagtgcaggcctatgacgccgtgctgctggacctcaacctgcctttgaacggtcaagcc
cacgcggcacaaggcagcggtctgcagctcctgcgcgaagcacgtgcgcgtggtgaccgc
acacccgtgctggtgctgacggcgcgcaaccgcaccgacgaacgcatagccggtctagat
gccggcgctgacgactatctgggcaagccctttgatttagaagaagtggaagcccgcctg
cgtgccctagtgcgtcgcacgcaaggtgtggacgacgaggtgcaagtgggccaactgcgc
ctgcaccgcaagctgcgccgcatctttgtgaatgacgccgatttggctttacccgccaga
gagtttgaggtgctgtgcgagctcatgacgccaccgggtcgcgcggttagcaagcgcgtg
ttgtctgacaagctgtctggctttgatgaagctttgggcgacaacgcactcgaagctttt
atttctcgcttgcgcaaaaagctggctgacagtggtgcgtgcattcgcaccctgcgcggt
atcggctatgttttagaagaacagccatga
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