Limnohabitans sp. TEGF004: LTEGF4_06110
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Entry
LTEGF4_06110 CDS
T11140
Name
(GenBank) ABC transporter substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
limt Limnohabitans sp. TEGF004
Pathway
limt02010
ABC transporters
limt02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
limt00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LTEGF4_06110
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LTEGF4_06110
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
limt02000
]
LTEGF4_06110
Transporters [BR:
limt02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
LTEGF4_06110
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
LppC
Motif
Other DBs
NCBI-ProteinID:
BDU54930
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All DBs
Position
617597..618781
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AA seq
394 aa
AA seq
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MHAFRRSLIALSLGLACASGFAQNDAPVKVGLLSTLSGPGAGLGVDIRDGFQLAVKLSGG
KFSGKAVDVIVADDQASPDVGRQTADRLVKRDKVDFMTGIVFSNVMLAVGAPTFQSKTFY
ISANAGPSQFAGEQCNPYFFSASYQNDNMHEAVGKVVTDKGFKKVALIAPNYPAGKDAIA
GFKRFFKGEVASETYTALNQLDYGTELSKLRATKPDAVYIFLPGGMGINFIKQFVGAGLS
KDITLFGPGFSGDEDVIKAVGEPMLGMFNTSQWGHDMDNAANKKFVAEFEKAYGRLPTLY
AAQGFDAARLIEAAVRDSKGKLDDKAAVRKALEAAKFDSVRGAFKFNSNHFPIQDYYLRV
ITKDAKGRVTNRTLSPVFKNHADAYVASCKMPSL
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcttttcgccgttctttgattgccctgagtttgggcttggcttgcgcatctggt
tttgcgcaaaacgacgcacctgtgaaggtcggtttgctcagcaccttgtcaggccccggc
gcgggtttgggcgttgacatccgtgacggctttcagctcgcggtcaaactgtcgggtggc
aagttcagcggtaaggccgtggatgtcatcgtggccgacgaccaagccagccccgatgtg
ggccgccaaactgcagaccgtttggtcaagcgcgacaaggtcgacttcatgacgggcatc
gtgttctccaacgtcatgttggctgtgggcgcgcccaccttccaatctaaaaccttctac
atcagcgccaacgctggcccatcgcagtttgcgggcgagcagtgcaacccttacttcttc
agcgcgtcttaccaaaacgacaacatgcacgaagccgtgggcaaagtggtgacagacaaa
ggctttaagaaagtcgctttgatcgcgcctaactacccagcaggcaaagatgcgattgct
ggcttcaagcgtttcttcaaaggcgaagtggcatcagagacctacaccgctttgaaccaa
ctcgactacggcacagagctgtctaagctgcgtgcgaccaagcctgacgctgtgtacatc
ttcttgcccggcggcatgggcatcaacttcatcaagcagtttgtgggcgcgggtttgtct
aaggacatcactttgtttggccctggcttctcaggcgatgaagacgtgatcaaagccgtg
ggtgagcccatgctgggcatgttcaacacctcgcaatggggccacgacatggacaatgcg
gctaacaaaaagtttgtggccgagttcgagaaagcctatggccgtttgcctacgttgtac
gcagcgcaaggttttgacgcagcgcgtttgatcgaagctgctgtgcgtgacagcaaaggc
aagctcgacgacaaagccgctgtgcgcaaagctttggaagcggccaagtttgattcggtg
cgtggtgcgttcaagttcaacagcaaccacttccccattcaagactactacttgcgcgtc
atcaccaaagacgccaaaggccgcgtgaccaaccgcactttgagccccgtgttcaaaaac
catgcggacgcttacgtagccagctgcaagatgcctagcctgtaa
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