Limnohabitans sp. TEGF004: LTEGF4_06980
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Entry
LTEGF4_06980 CDS
T11140
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
limt Limnohabitans sp. TEGF004
Pathway
limt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
limt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LTEGF4_06980 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
limt03400
]
LTEGF4_06980 (mutS)
DNA repair and recombination proteins [BR:
limt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
LTEGF4_06980 (mutS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_I
MutS_III
MutS_IV
MutS_II
MutS_C
Abhydrolase_4
Motif
Other DBs
NCBI-ProteinID:
BDU55017
LinkDB
All DBs
Position
complement(702167..704881)
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AA seq
904 aa
AA seq
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MRDLSGHTPMMQQYLGLKADHPETLLFYRMGDFYELFFADAEKVTRLLDITLTQRGQSNG
EPVVMAGVPFHSLETYLSRLIKLGESVAICEQVGDVGASKGPVERKVVRVVTPGTLTDSA
LLSDKTEAYVLAIHQSDRAGCGLAWLSVTQGLVHLAECETAELPNWIARVAPSEIIYSAE
VSPAFEQQLKNFCSNLGLPAQVRPAFQFDAALGGRKLLEHLQAASLNAWNAQDVVQAHAA
AAALLAYAEHTQGRALTHMHGVYVARNDALIDLPLTTRRNLELTQTLRGEDSPTLFSLLD
TCMTGMGSRQLKNWLLSPERDRTQAMHRLAAIEALQDNRTQSYKVLRDALKGSGDVQRIS
ARVSLRQVRPRELVSLGQALQKALRIQPLIPIASEARAVERSAKVKEELAQRAGDTQQSA
LPPSLLSPTLLVQIAQDMGVPPECGALLERALLPEPAVLVRDGGVIGHGYDADLDELRAI
QNNCDGFLLELEARERERTGIANLRVQFNKVHGFYIEVTQGQIDKVPADYTRRQTLKNAE
RFITPELKTFEDKALSAQERALAREKFLFEQLLDTLQQFVPALTRLAQAVATLDALCALA
ERSLTLGWCAPEFVKTPCIEIEQGRHPVVEARLAETHGVVAGGAAKTFIANDTRLGHLHR
MQVITGPNMGGKSTYMRQVAIIVLLASIGSHVPATACRLGPIDAIHTRIGAADDLANAQS
TFMLEMTEAAQILHAATPHSLVLMDEIGRGTSTFDGLALASGIATHLHDKTQAFTLFATH
YFELTEFPANHRAAVNVHVSAAESGASIVFLHEIQPGPASRSYGIQVARLAGMPSAVLSH
ARHALASLEAGADASKVQVDLFAPPPLQDDVGPSPLQAKLAEIDPDKLSPRDALDALYQL
KKLL
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgatttgtctgggcacacacccatgatgcagcagtacttggggctcaaagctgac
caccccgagacgctgttgttctaccgcatgggcgacttttacgagttgttctttgcggac
gctgagaaggtcacgcgcctgctcgacatcacgctcacgcaacgcggccagtccaacggc
gagcccgtggtgatggccggtgtgccgtttcactcgctcgaaacctacctctcacgcctc
atcaagctaggcgaatccgtggcgatttgcgagcaagtgggcgatgtgggtgcgagcaaa
ggtcctgtcgagcgcaaagtggtgcgcgtggtcacgccgggcacgctcacagacagcgcc
ttgctcagcgacaaaaccgaagcctatgtattggccattcaccaaagcgaccgcgccgga
tgcggcttggcctggctcagcgtcacgcaaggcttggtgcacttggccgagtgtgagaca
gcagagctgcccaactggattgcccgcgtggcccccagcgaaatcatttacagcgccgag
gttagccccgcgtttgagcaacagctgaaaaacttttgcagcaaccttggcctgcccgct
caagtgcgccccgcatttcagtttgatgccgctttgggtggccgcaagctgctggagcat
ttgcaagccgcctcgctcaatgcgtggaacgcacaagacgtagtgcaagctcacgccgcc
gccgccgcactgctggcctacgctgaacatacccaaggtcgcgccctcacacacatgcac
ggcgtgtacgtggcacgcaacgatgcgctgatcgacctgccgctcaccacccgtcgcaac
ctagagctgacccaaacactgcgcggcgaagactcgcccaccttgttctcgttgctcgac
acctgcatgacgggcatgggcagccgccagctcaaaaactggctgctctcgccagagcgc
gaccgcacgcaagccatgcaccgcttggccgctattgaagcgctgcaagacaaccgcacg
caaagctacaaagtgctgcgcgacgccctcaaaggctcaggcgatgtgcagcgcatcagc
gcccgcgtgtcgctgcgccaagtgcgtccacgtgaattggtgtccttaggtcaggcgctg
caaaaggcgttgcgcattcagccgctgattcctatcgcctcagaagcgagggcggtggag
cgctctgcgaaggtcaaggaggagctcgcgcagcgagcgggggacacgcagcagagcgct
ctgccgccctcgcttctgtcgcccacgttgttggtgcaaatcgcccaagacatgggcgtg
ccgcccgaatgcggtgcattgctcgaacgcgcattgctgcccgagcccgccgtcttggtg
cgcgatggtggcgtcattggccacggctacgacgctgacctggacgagctacgcgccatc
caaaacaactgcgatggcttcttgcttgaactcgaagcccgcgaacgcgagcgcaccggc
attgccaacctgcgcgtgcagttcaacaaagtgcatggcttttacatcgaggtcacgcaa
ggccagatcgacaaagtgccggccgactacacgcgccgccaaaccttgaagaacgccgag
cgcttcatcacgcccgagctcaaaacctttgaagacaaagcgctcagcgcccaagagcgt
gccctagcccgcgagaagtttttgttcgagcaactgctcgacaccttgcagcagttcgtg
cccgcactcacccgcttggcgcaagccgtggccacgctcgacgcactgtgcgccttggcc
gaacgctcgctcacgctgggctggtgcgcacctgagtttgtgaaaacaccgtgcattgaa
attgagcaaggccgccaccccgtggtggaagcccgcttggctgaaacgcatggcgtggtg
gctggcggcgcagccaaaaccttcattgccaacgacacgcggctgggccatctgcaccgc
atgcaagtcatcaccggccccaacatgggcggtaagtcgacctacatgcgccaagtggcc
atcatcgtgctgctcgccagcattggcagccatgtgcccgcaacggcttgccgcttaggc
ccgattgacgccatccacacccgcattggtgcggccgacgacttggccaacgcgcaatcg
accttcatgctggaaatgaccgaggccgcgcaaatcttgcacgctgccacgccgcacagc
ttggtgttgatggacgagattggtcgcggcacatccacctttgacggcttggccttggcc
agcggcattgccacccacttgcatgacaagacccaagccttcacgctgtttgccacgcat
tactttgaactcaccgaattccctgccaaccaccgcgctgcggtgaacgtgcatgtgagc
gcggccgagagtggcgcaagcattgtgttcttgcacgaaattcagcccggtcccgccagc
cgcagctacggtattcaagtggctcgcttagctggcatgccttctgctgtactcagtcat
gcccgccatgcgttggcctcgcttgaagcgggggctgacgcatcgaaggtacaagtcgat
ctgtttgcgccaccgccgttgcaagacgatgtgggccccagcccactgcaagccaagctg
gccgagatcgaccccgacaaactcagtccacgcgatgcgttggacgctctgtatcaattg
aagaaactgttatga
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