Limnohabitans sp. TEGF004: LTEGF4_09170
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Entry
LTEGF4_09170 CDS
T11140
Name
(GenBank) acetyl/propionyl-CoA carboxylase subunit alpha
KO
K01965
propionyl-CoA carboxylase alpha subunit [EC:
6.4.1.3
]
Organism
limt Limnohabitans sp. TEGF004
Pathway
limt00280
Valine, leucine and isoleucine degradation
limt00630
Glyoxylate and dicarboxylate metabolism
limt00640
Propanoate metabolism
limt01100
Metabolic pathways
limt01110
Biosynthesis of secondary metabolites
limt01120
Microbial metabolism in diverse environments
limt01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
limt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LTEGF4_09170
00640 Propanoate metabolism
LTEGF4_09170
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
LTEGF4_09170
Enzymes [BR:
limt01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.3 propionyl-CoA carboxylase
LTEGF4_09170
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
PCC_BT
Biotin_lipoyl
Dala_Dala_lig_C
ATP-grasp
ATP-grasp_3
ATP-grasp_5
Biotin_lipoyl_2
GARS_A
ATPgrasp_ST
HlyD_3
GCV_H
Motif
Other DBs
NCBI-ProteinID:
BDU55236
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Position
917172..919220
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AA seq
682 aa
AA seq
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MFTKILIANRGEIACRVIATAHKMGIKTVAVYSEADKEARHVQLADEAVLIGPAASRESY
LVADKIIAAAKATGAQAIHPGYGFLSENAEFSKRCEDEGIAFIGPRHFSISAMGDKIESK
KLAGAAGVNCIPGYNDAIDTAEEAVKIAQGIGYPVMIKASAGGGGKGLRVAFNDKEAFEG
FTSCRNEARNSFGDDRVFIEKFVEEPRHIEIQVLGDSHGNVVFLNERECSIQRRHQKVIE
EAPSPFISEATRKAMGEQAVQLAKAVKYQSAGTVEFVVGKDQSFYFLEMNTRLQVEHPVT
EAITGLDLVEQMIRVAAGEKLTLTQVDVKRNGWAIECRINAEDPFRNFLPSTGRLVRFQT
PKQTMFQGNTADLLGVRVDTGVQDGGEIPMFYDSMIAKLIVHGKDRNDAIAKMREALNGF
VIRGISSNIPFQAALLAHPKFVSGDFNTGFIAEQYAHGFRAEDVPHEDHDFLAALAAFVR
RKSRERAAGLSGQLPGYDVQIGQDYAVVELGQGGNNRYVLVHVDEFIGKPGVAQITIAGK
TYAIESKSRLNDIRIEGTCNGKPFTAQVERGTLKNPLALQVQHNGTRIEALVMSPRMAEL
HKLMPFKAPPDLSKYVLSPMPGLLVEVSVTPGQKVQAGERVAVIEAMKMENVLFAAADGV
VKKVVAAKGESLTVDQMIVEFE
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgtttacaaaaattctgattgcaaaccgtggcgaaatcgcatgccgcgtcatcgccacc
gctcacaaaatgggcatcaaaaccgtggccgtttactctgaagccgacaaagaagcacgt
catgtgcaactggctgatgaagctgtgttgattggcccagcggcctcgcgcgagtcttac
ctcgtggctgacaaaatcatcgcggcagccaaggcaactggcgcacaagctattcaccct
ggctacggctttttgagtgagaacgccgagttctcaaagcgctgcgaagacgaaggcatt
gccttcatcggcccacgccacttctcaatctccgccatgggcgacaagattgaatccaag
aagttggctggtgctgcgggcgtgaactgcattcctggctacaacgacgccatcgacacc
gctgaagaagcggtgaagattgcccaaggcattggctaccccgtcatgatcaaggcctca
gctggtggcggtggtaaaggcttgcgcgttgcattcaacgacaaagaggcctttgaaggt
ttcacctcttgccgtaatgaagctcgcaatagctttggcgatgaccgcgtgttcatcgag
aagtttgtcgaagagccgcgccacatcgaaatccaagtgctgggcgacagccacggcaac
gtggtgttcttgaacgagcgcgagtgctcgattcaacgccgtcaccaaaaagtgattgaa
gaagcgccatcacccttcatcagcgaagccacgcgcaaagccatgggcgagcaagccgtg
cagttggccaaggcggtgaaataccaatccgcaggtacggtggagtttgtggtcggcaaa
gaccaaagcttctacttcctcgagatgaacacacgtttgcaggtggaacaccctgtgacc
gaagccatcacaggcctcgacttggtcgagcaaatgattcgcgtggcagcaggtgaaaaa
ctcacactgacgcaagtcgatgtcaaacgcaatggttgggctattgagtgccgtatcaac
gccgaagacccgttccgcaacttcttgccttccactggccgtttggtgcgtttccaaacg
ccaaaacaaaccatgttccaaggcaacaccgctgacttgctcggcgtgcgtgtggacacc
ggtgtgcaagacggtggcgagattccgatgttctacgactcgatgatcgccaagctcatc
gtgcacggcaaagaccgcaacgacgcgattgccaaaatgcgcgaagcactgaacggcttt
gtgattcgcggcatcagctcgaacatcccattccaagccgctttgttggcgcatcccaag
tttgtctcgggtgacttcaacacgggcttcattgctgagcaatacgcgcacggcttccgc
gctgaagacgtgccacacgaagaccacgacttcttggctgccttggctgcgtttgtgcgt
cgtaaatctcgcgaacgtgccgcaggtttgagcggtcagctgcctggctacgacgtgcaa
attggtcaagactacgcagtggtcgagttgggccaaggcggcaacaaccgctacgtgtta
gtgcatgtggacgagttcatcggcaaacccggtgtggcgcaaatcaccatcgctggaaaa
acttacgcgatcgaaagcaagtcacgtttgaacgatattcgcatcgaaggcacttgcaac
ggcaagcctttcacagcgcaagtcgagcgcggcactttgaaaaacccattggctttgcaa
gtgcagcacaacggcacgcgcatcgaagctttggtgatgtcgccacgcatggccgagttg
cacaagctcatgccattcaaagcaccaccagacttgagtaagtacgtgttgtcgcccatg
cctggcttgttggtcgaagtgtctgtgacacctggccaaaaagtgcaagcgggtgagcgc
gtcgccgtcatcgaagcgatgaagatggaaaacgtgttgtttgcagctgcagacggcgtg
gtcaaaaaagtggtggccgctaagggcgaatcattgactgtggaccagatgattgtggag
ttcgaataa
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