Limnohabitans sp. TEGF004: LTEGF4_10010
Help
Entry
LTEGF4_10010 CDS
T11140
Symbol
ispF
Name
(GenBank) 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
KO
K01770
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:
4.6.1.12
]
Organism
limt Limnohabitans sp. TEGF004
Pathway
limt00900
Terpenoid backbone biosynthesis
limt01100
Metabolic pathways
limt01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
limt00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
LTEGF4_10010 (ispF)
Enzymes [BR:
limt01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.12 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
LTEGF4_10010 (ispF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YgbB
Motif
Other DBs
NCBI-ProteinID:
BDU55320
LinkDB
All DBs
Position
1007787..1008269
Genome browser
AA seq
160 aa
AA seq
DB search
MTVPSFRIGEGWDVHALVEGRPLMLGGVRIEHTHGLLGHSDADVLLHAITDALLGAAALG
DIGRHFSDKDAAYKGADSWVLLQKTAEMVRAAGFQIGNIDSTVIAQAPKLAAHMPVMCQR
IAEALEIDVSRVNVKAKTAEKIGPVGQGLSMEARAVALIY
NT seq
483 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtaccctcatttcgaattggtgaaggctgggatgtacatgctctggtggaaggt
cgcccgctgatgctgggtggtgtgcgcattgagcacacacacggcttgctaggtcactca
gatgccgatgtgttgctgcacgccatcactgatgcgttgctgggtgctgcagcgctgggt
gacattggtcggcacttctcagacaaagatgctgcctacaaaggtgcagattcttgggta
ttgctgcaaaagacagctgagatggtgcgtgctgcaggttttcagattggcaacatcgac
agcaccgtgattgcgcaagcccctaagctggcagcgcatatgccagtgatgtgtcaacgc
attgctgaggcgttagagattgatgtgtcgcgcgtgaatgtgaaggccaagacagccgaa
aaaataggccctgtgggacagggcctaagtatggaagctcgcgcagtggcgttgatttat
tga
DBGET
integrated database retrieval system
