Limnohabitans sp. TEGF004: LTEGF4_10170
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Entry
LTEGF4_10170 CDS
T11140
Symbol
bamA
Name
(GenBank) outer membrane protein assembly factor BamA
KO
K07277
outer membrane protein insertion porin family
Organism
limt Limnohabitans sp. TEGF004
Brite
KEGG Orthology (KO) [BR:
limt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
limt03029
]
LTEGF4_10170 (bamA)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
limt02000
]
LTEGF4_10170 (bamA)
Mitochondrial biogenesis [BR:
limt03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
LTEGF4_10170 (bamA)
Transporters [BR:
limt02000
]
Other transporters
Pores ion channels [TC:
1
]
LTEGF4_10170 (bamA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Omp85
POTRA
Motif
Other DBs
NCBI-ProteinID:
BDU55336
LinkDB
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Position
1025799..1028102
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AA seq
767 aa
AA seq
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MQFSLFRRTTLAQTAAFIAGTVMALHALAADPFNVRDIRVEGLQRVEPGTVFASIPFRVG
DDYTDDKGAAAIRSLFALGLFKDVRIEVNGDVLVLIVEERPNIAAVEFIGTKEFDKDTLK
KALKDIGLAEGRPFDKALADRAEQELKRQYVNRSLYGAEIITTITPAERNRVNLSFTVVE
GDLAKIKEMRVVGAKAFDESKLLDQFDQGTGNWLSWYTKSDRYSRTKLNADLETLRAWYL
SRGYLEFRIDSTQVAISPNKQDISVTINVTEGDRFVVSEVAMEGYYLGKDDEFKSLVEIK
AGQAYNADDVAKTTKAFNEYFGNFGFAFARTDVRPEIDRTTNRVKLVLVADPARRAYVRR
INIVGNNRTRDQIVRREFRQTESSWYDGEKIRLSRDRVNRLGYFKDVDIDTQEVPSSQDQ
VDLNVNVVEKPTGMLTLGAGFSSAEKVTLSFGIQQDNVFGSGHNLGLQVSTSKYNQYYVL
NTTDPYFTEDGVSRTFELYHRASKPYVEQGGNYRMVTSGLGLRFGIPFSELDRVFVGIAA
ERTELVQGTNMPAKYAELCTQFGCKAQNIPVTAGWARDSRDSYLNPNNGKFVRLNTELGA
IGDARYAKLGGQYQQYFPITKQYTFAFNADLGLGKGLNGQSLPFYKNYYSGGLGSVRGFE
QGTLGPRDVSNALVIGGAKKFTLNTEFLMPFPGAGNDRTLRLYGFYDMGNVYGEESKFDL
KLLRSSYGVGLSWVSPMGPLRFAWARPVRAFSGDRIQQLQFQIGTSF
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgcaattttctttatttcgtcgcaccacactggcccaaacggcagcattcattgcgggc
accgtgatggcactccatgcgctggcggctgaccccttcaatgtgcgcgacattcgtgtg
gaaggtttgcagcgtgtggagcctggcaccgtgtttgcctcgattcccttccgcgtgggt
gacgactacaccgacgacaaaggtgcagcagcgattcgcagcttgtttgccttaggcctg
ttcaaggatgtacgcattgaagtcaatggcgatgtgttggtgctgatcgtcgaagagcgt
cccaatattgctgcggttgaattcattggtaccaaagagtttgacaaagatactttgaag
aaagcgctcaaagatattggtttggccgaaggtcgtcccttcgacaaagctttggctgac
cgtgctgagcaggagctcaagcgtcagtatgtcaaccgcagtttgtatggcgctgaaatc
atcaccacgatcaccccagctgagcgcaaccgtgtgaacctctctttcacggtggttgaa
ggcgatttggccaaaatcaaagaaatgcgtgtggtgggcgccaaagcgtttgacgagtcc
aaactcttggaccagttcgatcaaggcacgggtaactggttgagctggtacacaaagtca
gaccgttactcccgcaccaagctcaatgcggacttggagactttgcgtgcgtggtacctg
tctcgtggttatttagagtttcgtattgactcaacccaagtcgcgatttctccaaacaaa
caagacatcagcgtcaccatcaatgtgacagaaggcgatcgttttgtcgtgtctgaagtg
gcgatggaaggctactatctcggcaaagatgatgaattcaaatcgctggtggaaatcaag
gcagggcaagcctataacgccgatgacgtggccaaaaccaccaaggcattcaacgaatac
ttcggtaacttcggttttgcattcgcacgcacggatgtgcgtccagagattgatcgcacc
acgaatcgtgtgaagttggttctggtggctgaccccgcgcgccgtgcgtatgtacgccga
atcaacatcgtgggcaataaccgcacgcgcgatcaaatcgtgcgtcgtgaattccgccaa
acagaatcatcttggtatgacggcgaaaaaattcgtttgtcgcgtgaccgtgtgaaccgt
ttgggctatttcaaagatgttgatattgatacgcaggaagtcccatcatcccaagatcag
gtcgatttgaacgtgaacgttgtcgagaagccaactggcatgctgactttgggggctggt
ttctccagcgctgaaaaagtgacgctgtcttttggtatccagcaagacaacgtgttcggt
tctggacataatttaggtttgcaagttagtaccagcaagtacaaccagtattacgtgctg
aacaccacggatccgtatttcacagaggatggtgtttcacgtacgtttgagttgtaccac
cgcgcgagcaagccgtatgtggagcagggtggtaactaccgcatggtcacctccggttta
ggtttacggtttggaattcctttcagcgaactcgatcgagtgtttgtgggaattgccgct
gagcgaactgagcttgtgcagggaacgaatatgccagccaaatacgcggagttgtgtaca
cagtttggctgtaaagctcaaaatattcctgttactgcaggttgggccagagatagtcgt
gacagttatttgaatcctaacaatggaaaatttgttcgtctgaatactgagctcggcgcc
atcggcgatgcccgatatgccaagcttggagggcaatatcagcagtatttccccattacc
aagcaatacacttttgcattcaatgccgatctgggtttaggcaagggccttaacggtcaa
tccttgccgttctataaaaattattactctggtggtttaggctctgtgcgtggttttgag
caagggactttaggtcctcgcgatgtgtctaacgcactcgttattggcggtgcaaaaaaa
ttcactttgaacactgaatttttaatgccgttcccaggcgctggtaatgaccgtactctg
cgcctttatggcttctatgacatgggtaacgtgtatggtgaagagtcaaagtttgattta
aagctgctgcgtagttcttacggcgtaggtctgagttgggtctctcctatgggcccgtta
cgcttcgcttgggctcgtcccgtgcgcgcattctcaggcgatagaatccaacaattgcaa
ttccaaatcgggacatccttctga
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