Limnohabitans sp. TEGF004: LTEGF4_10260
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Entry
LTEGF4_10260 CDS
T11140
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase (glutamine-hydrolyzing)
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
limt Limnohabitans sp. TEGF004
Pathway
limt00220
Arginine biosynthesis
limt00240
Pyrimidine metabolism
limt00250
Alanine, aspartate and glutamate metabolism
limt01100
Metabolic pathways
limt01110
Biosynthesis of secondary metabolites
limt01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
limt00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
LTEGF4_10260 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
LTEGF4_10260 (carB)
00220 Arginine biosynthesis
LTEGF4_10260 (carB)
Enzymes [BR:
limt01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
LTEGF4_10260 (carB)
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GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
ATPgrasp_Ter
Dala_Dala_lig_C
ATP-grasp_4
ATP-grasp_3
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
BDU55345
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Position
1034682..1037960
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AA seq
1092 aa
AA seq
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MPKRTDLKSILIIGAGPIIIGQACEFDYSGVQACKALREEGYKVILINSNPATIMTDPAT
ADVTYIEPITWQTVEKIIAKERPDAILPTMGGQTALNCALDLWHHGVLAKYKVELIGATP
EAIDKAEDRLKFKDAMTKIGLGSARSGIAHSMEEAWDVQKSLGFPTVIRPSFTLGGTGGG
IAYNPEEFEIICKRGLEASPTNELLIEESLLGWKEYEMEVVRDKADNCIIICSIENLDPM
GVHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVDTGGSNVQFSINPKDGRMVVIEM
NPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELRNEITGGATPASFEPSIDYVVTKIP
RFAFEKFPTADSRLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDGMNEKTQDREVLE
KELGEPGPERIWYVGDAFAMGLSVDEVFALTKIDPWFLVQIEEIVKIELEVETTTLEAIT
AEELRALKKKGFSDRRLAKLLKTTEHVVRARRHELNIRPVYKRVDTCAAEFSTDTAYMYS
CYEGNGNAFGVGDAECEAEPTNNKKIMVLGGGPNRIGQGIEFDYCCVHAALAMREDGYET
IMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVDKEKPTGVIVQYGGQTPLKLALDLEA
AGVPIIGTSPDMIDAAEDRERFQKLLHDLGLRQPPNATARTEPEALEKAAALGYPLVVRP
SYVLGGRAMEIVHEQRDLERYMREAVKVSHDSPVLLDRFLNDAIECDVDCLRDPEGKTFI
GGVMEHIEQAGVHSGDSACSLPPYSLSEATVTELKRQSAAMAGALNVVGLMNVQFAIQHV
DGKDVIYVLEVNPRASRTVPYVSKATGIQLAKVAARCMAGQTLASQGITKEVTPPYFSVK
EAVFPFVKFPGVDTILGPEMKSTGEVMGVGKTFGEAFVKSQLGAGTKLPRPRDADGRSTG
KVFISVKNNDKPRVIEVARQLSALGFELIATKGTAASIVEAGVPCDVVNKVTEGRPHIVD
SIKNNEVVLVINTVEERRNAIADSRHIRTSALLNRVTTFTTIAGAEAAVEGMKYMDKLDV
ISVQEMHAQLTA
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagcgcaccgacctaaaaagcattctcatcattggcgcaggcccgatcatcatt
ggtcaggcctgtgagttcgattactctggcgtgcaagcttgtaaagctctgcgtgaagag
ggttacaaagtcatcttgatcaacagcaaccccgccacgatcatgactgaccctgccacg
gcagacgttacctacattgagcccatcacttggcaaacggtcgagaagatcattgccaaa
gagcgtccagacgccatcctgcccaccatgggcggccaaacggcgctcaactgcgcgttg
gatttgtggcaccacggcgtgttggccaagtacaaggttgagctgattggcgcaacccca
gaggccatcgacaaagccgaagaccgcttgaagttcaaagacgccatgaccaagattggt
ctgggctcagcacgttcaggtattgcgcacagcatggaagaagcatgggatgtgcaaaag
agtttgggtttccccaccgtcattcgccccagcttcacgctcggcggcacaggcggcggt
attgcctacaaccctgaagagtttgaaatcatctgtaagcgcggcttggaagcttcgccc
accaacgagctgttgattgaagaatctttgctcggttggaaagagtatgagatggaagtg
gtgcgcgacaaggcggacaactgcatcatcatttgctcgatcgaaaacttggaccccatg
ggcgtgcacaccggtgactccatcactgtggcacccgcacaaaccttgaccgacaaggaa
taccaaattttgcgtaacgcctctttggctgtgttgcgcgaaattggtgtggacactggc
ggctcgaacgtgcagttctcgatcaatcccaaagacggccgcatggtcgtcattgagatg
aatccacgcgtgtcgcgttcatctgcgttggcttctaaagccacaggttttccgattgcg
aaagtcgcagccaagttggctgtgggctacacactcgacgagctgcgcaacgaaatcaca
ggcggtgcaacgccagcttcgtttgagccatcgatcgactacgtggtgaccaagatccca
cgttttgcgtttgagaaattccccacggctgacagccgcttgaccacccaaatgaaatcg
gtgggtgaggtaatggccatgggccgtactttccaagagtccttccaaaaagccctgcgt
ggtttggaagtgggcgtggatggcatgaacgaaaaaacccaagaccgcgaagtgctcgag
aaagaactgggcgaacctggtcccgagcgcatttggtatgtgggcgatgcattcgccatg
ggcttgagcgtggacgaggtgtttgccttgaccaagatcgacccttggttcttggtgcaa
atcgaagagatcgtgaagatcgaactcgaagttgaaaccaccacgcttgaagccatcacg
gccgaagaattgcgcgccttgaaaaagaagggcttctcagaccgtcgtttggccaagttg
ctcaaaaccactgagcatgtggtgcgtgcacgtcgccatgaactcaacattcgccctgtc
tacaagcgtgtggacacctgtgctgccgagttctcgaccgacaccgcttacatgtactcg
tgctacgaaggtaatggcaacgccttcggcgtgggagacgccgagtgcgaagctgaaccc
accaacaataaaaaaatcatggtgcttggcggcggtcctaaccgcattggtcaaggtatt
gagtttgactactgctgcgttcacgctgcgctcgccatgcgcgaagacggctacgaaacc
atcatggtcaactgcaacccagagaccgtgtcgaccgattacgacacatctgaccgtttg
tacttcgagccattgacgctcgaagacgtgctcgaaatcgtcgacaaagaaaagccaacc
ggtgtcatcgttcaatacggtggtcaaacgcctttgaagttggcgctcgatttggaagcg
gctggcgtgcccatcattggtaccagcccggacatgattgacgctgccgaagaccgtgag
cgtttccaaaagttgttgcacgacctcggtttgcgccagcctccaaatgccacggcacgc
acagagccagaagctttggaaaaagcggctgccttgggttaccccttggtggtgcgcccc
agctatgtgttgggtggccgtgccatggaaatcgtgcacgagcaacgcgacctcgagcgc
tacatgcgcgaagccgtcaaggtgtcgcatgactcacctgtgttgctcgaccgtttcttg
aatgacgcgatcgagtgcgatgtggactgtttgcgcgaccccgaaggcaagaccttcatc
ggcggcgtgatggaacacatcgaacaagcaggtgtgcacagcggtgactcggcttgctcg
ttgcccccttactctttgtccgaagccacagtgactgaactcaagcgccaatctgccgcg
atggccggtgctttgaatgtggtcggtttgatgaacgtgcagttcgcgattcaacatgtc
gacggcaaagacgtcatctacgtgctcgaagtcaacccacgtgcttcacgcaccgtgcct
tatgtgtctaaagccacgggcatccagctggccaaggtcgctgcacgttgcatggcgggg
caaacacttgcgtcgcaaggtatcaccaaagaagttacgccaccttatttcagtgtgaaa
gaagcggtgttcccgttcgtgaagttcccaggcgtcgatacgattctgggtccagagatg
aagtccactggcgaagtcatgggcgttggcaaaacatttggcgaagcctttgtgaagagc
caattgggtgcaggcaccaagttgcctcgtcctcgtgatgctgatggtcgctctaccggt
aaggtgttcatctcggtgaagaataacgacaagccacgcgtcattgaggtggcccgtcag
ttgtctgctttgggttttgaattgattgcaaccaagggcacagcggcatccattgttgaa
gccggcgtgccttgtgatgtggtgaacaaagtgaccgaaggccgtccacacattgtggat
agcatcaagaataacgaagtggtgttggtcatcaacaccgtggaagagcgtcgcaatgcg
attgctgattcacgccacattcgcacctcggcattgctcaaccgtgtgaccaccttcacc
accatcgcaggcgcagaagccgctgtggaaggcatgaagtacatggacaagttggatgtc
atttctgtgcaggaaatgcacgctcaactgaccgcctaa
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