Limnohabitans sp. TEGF004: LTEGF4_11120
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Entry
LTEGF4_11120 CDS
T11140
Name
(GenBank) AMP-dependent synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
limt Limnohabitans sp. TEGF004
Pathway
limt00061
Fatty acid biosynthesis
limt00071
Fatty acid degradation
limt01100
Metabolic pathways
limt01212
Fatty acid metabolism
limt02024
Quorum sensing
limt04146
Peroxisome
Module
limt_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
limt00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
LTEGF4_11120
00071 Fatty acid degradation
LTEGF4_11120
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LTEGF4_11120
09145 Cellular community - prokaryotes
02024 Quorum sensing
LTEGF4_11120
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
limt01004
]
LTEGF4_11120
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
limt04147
]
LTEGF4_11120
Enzymes [BR:
limt01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
LTEGF4_11120
Lipid biosynthesis proteins [BR:
limt01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
LTEGF4_11120
Exosome [BR:
limt04147
]
Exosomal proteins
Exosomal proteins of breast milk
LTEGF4_11120
Exosomal proteins of breast cancer cells
LTEGF4_11120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
BDU55431
LinkDB
All DBs
Position
complement(1120391..1121926)
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AA seq
511 aa
AA seq
DB search
MARQFPKRAAIFHGTQAVATYAQWAQRCAHLAQQFQNAGLQPGDRVAIFMHNHQRYLEVL
FGAWWAGLAVVPINAKLHVREAQWIIDNAQACWAFVTSDVMADVTTNTPQQLTGLQRVID
VDSPEANALWTMPQASDAPPTKPIIERQSDDLAWLFYTSGTTGRPKGVMITHRNLMTMGL
AYFTDVDAITDQDAIVYAAPMSHGAGLYAIPHLMAGARHVVPASGGFDAAELFELGQSVG
PLSMFAAPTIVKRLVDHAEQTSLTPKACALAFKTIVYGGAPMYAADIQRALRIMGPCFVQ
IYGQGESPMVGTALSRFHLSDSTNPEHAQRLASIGIAQTPVQIRITDKHGHDLALGEVGE
VLIKGDSVMAGYWRNPEATQAAIRDGWLFTGDMGCLDAHGFLTLKDRSKDLIISGGSNVY
PREVEEVLLQAPGVSEVAVVGAPDPEWGEVIVAFVVLQQGSAVSAQDLDAYCLNEIARFK
RPKRYELVDSLPKNNYGKVLKTELRLRLTQP
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggcagtttcccaaacgcgctgctatttttcatggcacacaggctgtggctact
tacgcgcaatgggcacaacgctgcgcgcatttggcccaacagtttcaaaacgcaggcttg
cagcctggcgaccgcgtggccatcttcatgcacaaccaccagcgttacctagaagttctg
tttggcgcatggtgggcaggcttggccgtagtgcccatcaacgccaagctgcatgtgcgc
gaagcgcagtggatcatcgacaacgcgcaagcctgctgggcctttgtcacgtctgacgtg
atggccgacgtcaccaccaacacaccccaacaattgaccggcttgcaacgcgtcattgat
gtggacagcccagaggccaatgccttgtggaccatgcctcaagccagcgatgcgccacca
acaaagcccatcattgaacgccagtcagacgacctcgcttggttgttctacaccagtggc
acgacgggccgccctaaaggtgtgatgatcacccaccgcaacttgatgacgatgggcttg
gcttacttcaccgacgtggatgccatcactgaccaagacgccatcgtctacgccgcaccc
atgtcacacggtgctggcttgtacgccatcccacatttgatggcaggtgcacgtcatgtg
gtgccagcttctggcggctttgatgcagcggagttgtttgaactcggtcagtcggttggg
ccactttccatgtttgcagcacccaccatcgtcaaacgcttggtcgaccatgccgagcaa
acctcactcacacccaaagcttgcgccctagctttcaaaactatcgtctacggcggtgca
cccatgtacgccgcagacatccagcgcgcccttcgcatcatgggcccatgttttgtacaa
atttacggccaaggcgaaagcccgatggtgggcactgccctgtcgcgctttcatttgagc
gacagcactaaccccgaacacgcccaacgcttggcatctatcggcattgcccaaacgccg
gttcaaatccgtataaccgacaaacatggccacgacttggcgctaggcgaagtaggcgaa
gtgctcatcaaaggcgacagcgtcatggctggctactggcgcaaccctgaagccacccaa
gccgccattagagatggctggctcttcacgggcgatatgggctgcttagacgcacatggg
ttcctcacactcaaagaccgaagcaaagacctcatcatcagcggcggctccaacgtgtac
ccacgcgaagtggaagaagtgttattgcaagccccaggcgtgagcgaggtggccgtggtc
ggcgcacccgaccctgagtggggcgaagtcatcgtcgcctttgtggtgctgcaacaaggc
agcgcggtcagcgcccaagacctagacgcgtattgcctcaacgaaattgcccgtttcaag
cgccccaaacgctatgaattggtcgacagtctgcccaagaacaactacggcaaagtgctg
aaaaccgagctgcgactcagactcacgcagccctag
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