Limnohabitans sp. TEGF004: LTEGF4_11320
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Entry
LTEGF4_11320 CDS
T11140
Symbol
hisS
Name
(GenBank) histidine--tRNA ligase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
limt Limnohabitans sp. TEGF004
Pathway
limt00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
limt00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LTEGF4_11320 (hisS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
limt01007
]
LTEGF4_11320 (hisS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
limt03016
]
LTEGF4_11320 (hisS)
Enzymes [BR:
limt01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
LTEGF4_11320 (hisS)
Amino acid related enzymes [BR:
limt01007
]
Aminoacyl-tRNA synthetase
Class II (A)
LTEGF4_11320 (hisS)
Transfer RNA biogenesis [BR:
limt03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
LTEGF4_11320 (hisS)
Prokaryotic type
LTEGF4_11320 (hisS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
tRNA-synt_2b
HGTP_anticodon
tRNA-synt_2
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
BDU55451
LinkDB
All DBs
Position
1144198..1145559
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AA seq
453 aa
AA seq
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MRLPIVTTENKTTKPAKAQALTAVKGMNDLLPPASAQWEWLEEKVRGLMARHAYRNLRTP
IVEPTALFVRGLGEVTDIVEKEMYSFEDRLNGEQLTLRPEATAGVVRAVVEHNMLYNGGQ
RLYYMGPMFRHERPQRGRYRQFHQIGAEALGFPGAEVDAELILLAATLWQELGLQDVRLE
LNSLGQPDERAAHRTALIAHLEAHVDVLDEEAKRRLHTNPLRILDTKNPAMQAVVEAAPK
LIDFLGEASLAHFNAVKAILDASGVAYRINPRLVRGMDYYNLTVFEFVTDRLGSQGTICG
GGRYDYLIEQVGGKPAPAVGWALGVERVLELLKEQGTLPEAVGPDVYAIVPDATALPVVF
KTIQILRAQGMSVQMHAGAGEGMGSMKSQFKKADGSGAQFALIFGGDELARGEVTLKALR
DGAGAQEALPLADVTTRVAAKLAQGVAPSQTAG
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcctgcctatcgtgacgacagaaaacaaaacaacaaaacctgccaaagcccaagcc
ttgaccgctgtcaaaggcatgaacgacttgttgcctccagcctcagcccaatgggaatgg
ttggaagagaaggttcgcggtctgatggcacgccacgcgtatcgcaacttgcgcacaccc
atcgttgaacccaccgccttgtttgtgcgtggcttgggcgaggtgaccgacattgtggaa
aaggagatgtactcctttgaagaccgcctgaatggcgagcagctcacgctccgcccagag
gccacagccggtgtggtgcgtgcagtggttgagcacaacatgctctacaacggtggtcag
cgcctgtattacatgggcccgatgtttcgccacgagcgcccacaacgtggccgctatcgc
cagttccaccaaatcggcgcagaggctttgggttttcctggcgccgaggtggatgccgag
ctcattttgttggctgccacgctgtggcaagaactgggtttgcaagacgtgcgcttggag
ctcaacagcttgggccaacccgacgagcgtgcggcgcatcgcactgctttgattgctcac
ttagaagctcatgtcgatgtgctggacgaagaagccaagcgccgtttgcacaccaacccc
ttgcgcatcttggataccaaaaacccagcgatgcaagccgtggtcgaagccgcaccgaag
ttgatcgactttttgggcgaggcttcactggctcacttcaacgcggtgaaagccattttg
gatgcgagtggcgtggcctaccgcatcaacccacgcttggtgcgtggcatggactactac
aacctcaccgtgtttgagtttgtgaccgaccgcttgggctcgcaaggcaccatttgcggc
ggtggccgttacgactatctgattgagcaagtgggaggcaagcctgcgcccgccgtaggc
tgggccttgggtgtggagcgtgtgctggagttgctcaaagagcagggcacattgcccgag
gctgtggggcctgatgtgtacgccatcgtgcccgacgcgactgcattgcctgttgtgttc
aaaaccatccaaatcctgcgtgcgcaaggcatgtccgtgcaaatgcatgcgggggcaggt
gaaggaatgggcagcatgaaatcgcagttcaaaaaagccgatggcagcggcgcacagttc
gccctgatttttggcggcgatgagttggcgcgcggcgaagttaccctcaaagccttgcgc
gatggcgcgggtgcgcaagaggcgttgcccttggcagacgttaccacccgtgtggctgcc
aaacttgcgcagggcgtggccccgtctcaaaccgctggctga
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