Limnohabitans sp. TEGF004: LTEGF4_11950
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Entry
LTEGF4_11950 CDS
T11140
Symbol
ldcA
Name
(GenBank) muramoyltetrapeptide carboxypeptidase
KO
K01297
muramoyltetrapeptide carboxypeptidase [EC:
3.4.17.13
]
Organism
limt Limnohabitans sp. TEGF004
Brite
KEGG Orthology (KO) [BR:
limt00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
limt01002
]
LTEGF4_11950 (ldcA)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
limt01011
]
LTEGF4_11950 (ldcA)
Enzymes [BR:
limt01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.17 Metallocarboxypeptidases
3.4.17.13 muramoyltetrapeptide carboxypeptidase
LTEGF4_11950 (ldcA)
Peptidases and inhibitors [BR:
limt01002
]
Serine peptidases
Family S66
LTEGF4_11950 (ldcA)
Peptidoglycan biosynthesis and degradation proteins [BR:
limt01011
]
Precursor biosynthesis
Carboxypeptidase
LTEGF4_11950 (ldcA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S66C
Peptidase_S66
Motif
Other DBs
NCBI-ProteinID:
BDU55514
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All DBs
Position
1208982..1209911
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AA seq
309 aa
AA seq
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MAHIYIYSPSGAVRDKAAFKRGVARLKKLGHEVELDADALSSHTRFAGDDATRLAAIHRA
ADSGADVALISRGGYGLTRILPAIKYKQVAKAIAKGTQFVGLSDFTAFQNALLAKTGAVT
WAGPALGEDFGAEQPDDIMEACFDDMVSGQGEGAGWQLSKACAAANETRRPGVWARDAVL
WGGNLAVLVSLLGTPYFPQIKNGVLFLEDVGEHPYRVERMLTQLLHAGVLADQKAIVLGQ
FNSYKLTPHDKGFKLQSVVDWLRAQIKAPVLTDLPFGHVATKLCLPVGEKIDLVVEDRDA
LLLWAHADH
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggctcatatttacatctattctcccagcggcgcggtgcgcgacaaagcagctttcaaa
cgtggcgtggcacgcctgaaaaaactcggccacgaggtagagcttgatgctgacgcactc
agcagccacacccgttttgccggtgacgatgccactcgcttagcagccatccatcgcgca
gccgatagtggcgcagatgtggccttgatttcacgcggtggttacggcctcacacgcatc
ttgccagccatcaaatacaaacaagtggccaaagccattgccaaaggcacgcagtttgtg
ggcttgagcgacttcacggcttttcaaaatgcactgcttgccaaaactggggcggtcact
tgggcggggcccgccttgggcgaagactttggtgcagagcagccagacgacatcatggag
gcttgttttgacgacatggtcagcggccagggcgagggcgcgggttggcaattgtctaaa
gcttgcgctgcagctaatgagacacgccgccctggtgtatgggcacgcgatgccgtactt
tggggtggtaatttggctgtattggtttctttactcggcacgccctatttcccccaaatt
aaaaatggcgtgttgttcttagaagatgtgggtgaacatccataccgtgttgaacgcatg
ctgacgcagctgttgcatgcaggcgtattggctgatcaaaaagcgattgtgttgggtcag
ttcaacagctacaagctcacgccacacgacaaaggcttcaaacttcaaagcgtcgtcgat
tggctgcgcgcgcaaatcaaagcgcccgtactaactgatttgccgtttggccatgtcgca
accaagctctgtttacccgttggcgaaaagattgacttggtggtggaagatcgtgatgcc
ttattgctttgggcacatgctgatcattga
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