Limnohabitans sp. TEGF004: LTEGF4_12600
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Entry
LTEGF4_12600 CDS
T11140
Symbol
rcsB
Name
(GenBank) hemolysin secretion protein ShlB
Organism
limt Limnohabitans sp. TEGF004
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Gene cluster
GFIT
Motif
Pfam:
ShlB
POTRA_2
POTRA
DUF5824
Motif
Other DBs
NCBI-ProteinID:
BDU55579
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Position
complement(1304368..1306209)
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AA seq
613 aa
AA seq
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MKKLPVLLTLTAASVGIYLALDATGQLDSFRNVPPTPVVASAPVPDMVEEIKAADEPVPE
SVQAQASAPAAAPVTAPAAAPVSVAKVKAPQAQDIKLIVREIKFEGATAFSQAELKGVVS
EFVGQELTIEQAMAIPAQISKHYQNHNMVARATLVGALAREDGVLKVGVIESQIKPAQLD
KALTTMVTPEPMPMHMLSPPPVTSAPVPAPAPVAVSQVAKLEVSEDASVVTKFAEMSPNV
PMPSPKSGESQEDAETAFILKQYAHKSRQYELLFDNYGYSSTGSNRIGAGLVWNDTLSKG
DTLSLQGLKSQGSQYLQMAYNWTTGLDGLKLGANLSSFNFDVVNDLQNAVNLSGDGIKKG
LLLAYDLVNSPNQLSTLGLHYDVKSIHTTAATFTDSAYYDTKVMGIKFKGFEREMVPGGA
VFSYDAMFSKGTVDMAGSPNEAADLSGEQTAGEFSKFRLSASVFQPLGGVHAFYTGLTLQ
RASKNLDGSEKIYLGGPLGVRAYGVGEGMGSDGELVTFEFRQKLTANTTLSEFYDRGHVR
AWHDGSAPGAPANNSATLQGYGLSLTHRLDTGATLRGTWAHRLGDEPDTAAMPRGHSGQY
DRNRFWVSLESRF
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaactaccagtccttctgaccctcactgctgccagcgtcggcatttatttggcc
ttggatgccacgggtcagctcgacagttttcgaaacgtaccgcccacacccgtggtggcg
tcggcgcccgtgccagacatggtggaagaaatcaaggcggctgatgaacctgtgccagag
tcggtgcaagcacaagccagcgcgcctgccgctgcgccagtgacagcgccagcggctgcc
ccagtttcagtggccaaggtgaaagcgcctcaggcgcaagacatcaagctcattgttcgt
gagattaaatttgaaggcgcaacagccttcagtcaagccgaactcaaaggcgtggtcagc
gagtttgtgggccaagagctcaccattgaacaagcgatggccattccggcgcagatctct
aagcactaccaaaaccacaacatggttgcgcgtgcgaccttggtgggtgctttggcgcgt
gaagatggggtgctcaaagtgggcgtcatcgagagccaaatcaaacccgcacagctcgac
aaagcgctgaccaccatggtgacaccagagcccatgcccatgcacatgctgtcaccgccg
ccagtaacgtcagcgcctgtgccagccccagcgcctgtggctgtctcgcaagtggcgaaa
ctagaagtcagcgaagatgccagcgtggtgaccaagtttgcagagatgtcgcccaacgtg
ccgatgccaagccccaaatcgggcgagagccaagaagatgccgaaacggcattcatcttg
aaacaatacgcccacaagtcccgccagtacgaactgctgtttgacaactatggttactct
tccacaggcagcaaccgcatcggggctggcttggtatggaatgacaccttgtccaaaggc
gacaccttgtcgttgcaaggcttgaagtcgcaaggcagccaatacctgcaaatggcctac
aactggaccaccggcttggatggcctcaagcttggcgcgaacctatctagcttcaatttc
gatgtggtcaacgacttgcaaaacgcggtcaacctcagcggtgacggcatcaaaaagggc
ctgttattggcctacgacctggtcaatagccccaaccagttgagcactttaggattgcat
tacgacgtcaagtccatccacaccacagccgccaccttcaccgattcggcctactacgac
accaaagtcatgggcatcaagttcaaaggctttgagcgcgagatggtgcccggcggtgcg
gtcttctcttacgacgctatgttctcgaagggcacggtcgacatggcgggatcgcccaac
gaagccgccgatctcagtggcgaacaaacggcgggagagttttccaagtttcgtttgagc
gcttcggtattccagcccttgggtggtgtccatgcgttttataccggcttgacgcttcaa
cgcgccagcaagaacctcgatggctctgaaaaaatctacttgggtggccctttgggcgtg
cgagcttacggggtcggcgagggcatgggcagcgatggcgagttggtgacttttgaattc
aggcaaaaactcacggccaacaccacgttgtctgagttctatgaccgtggccatgtgcgt
gcttggcacgatggcagcgcaccaggtgcacctgccaacaacagcgccaccttgcaaggt
tatggcctgagtctgacgcaccgcttggatacgggtgccaccctccgaggcacttgggcc
caccgccttggcgatgagcctgacaccgccgccatgccacgcggccacagcggccaatac
gatcgcaaccgcttctgggtctcgctggagtcacgtttctaa
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