Limnohabitans sp. TEGF004: LTEGF4_15590
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Entry
LTEGF4_15590 CDS
T11140
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
limt Limnohabitans sp. TEGF004
Pathway
limt00260
Glycine, serine and threonine metabolism
limt00460
Cyanoamino acid metabolism
limt00630
Glyoxylate and dicarboxylate metabolism
limt00670
One carbon pool by folate
limt00680
Methane metabolism
limt01100
Metabolic pathways
limt01110
Biosynthesis of secondary metabolites
limt01120
Microbial metabolism in diverse environments
limt01200
Carbon metabolism
limt01230
Biosynthesis of amino acids
limt01240
Biosynthesis of cofactors
limt04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
limt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LTEGF4_15590 (glyA)
09102 Energy metabolism
00680 Methane metabolism
LTEGF4_15590 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LTEGF4_15590 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
LTEGF4_15590 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LTEGF4_15590 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
LTEGF4_15590 (glyA)
Enzymes [BR:
limt01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
LTEGF4_15590 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
Beta_elim_lyase
Aminotran_5
Apolipoprotein
Motif
Other DBs
NCBI-ProteinID:
BDU55878
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All DBs
Position
1653917..1655161
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AA seq
414 aa
AA seq
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MYNRNITIEQTDPELWASIQAENARQEHHIELIASENYASPAVMQAQGSQLTNKYAEGYP
GKRYYGGCEFVDVAEQLAIDRIKTIFGADAANVQPHCGASANEAVFLAFLKPGDTIMGMS
LAEGGHLTHGMALNMSGKWFNVVSYGLDSKEAIDYEAMEAKAREHKPKLIVAGASAYSLH
IDWERFAKIAKEVGAIFMVDMAHYAGLIAAGQYPNPVPHADVVTSTTHKSLRGPRGGIIL
MKAEHEKAINSAIFPGLQGGPLMHVIAAKAVAFKEAMQPEFKEYQAQVVKNAKIVAETLT
ARGLRIVSGGTQSHVMLVDLRSKKITGKEAEAALGAAHMTINKNAIPNDPEKPFVTSGVR
IGTPAMTTRGFKDEEARITANLIADVLDNPHDEANIAAVRAKVHALTSKFPVYK
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgtacaaccgcaacatcaccatcgaacaaaccgatccagaactctgggcttctattcag
gccgaaaacgcccgtcaagaacaccacatcgagctgatcgccagcgagaactacgcgtct
cccgctgtcatgcaagcccaaggctcacaactgaccaacaaatacgccgaaggctaccca
ggcaagcgctactacggtggctgcgaattcgtggacgtggccgaacaactggccatcgac
cgcatcaaaaccatcttcggtgcagacgctgccaacgtgcaaccccattgcggtgcatcg
gccaacgaagccgtgttcctcgctttcttgaagcccggcgacaccatcatgggcatgagc
ttggccgaaggcggtcacttgacccacggcatggccctgaacatgtctggcaaatggttc
aacgttgtgtcttacggcttggacagcaaggaagccatcgactacgaagcgatggaagcc
aaggcccgcgaacacaagcccaagctcatcgtggccggcgcttctgcctacagcttgcac
atcgactgggaacgctttgccaagatcgctaaggaagttggcgcgatcttcatggtcgac
atggcccactacgctggcttgatcgccgcaggccaataccccaaccccgtgcctcacgcc
gacgtggtgacatcgaccacacacaagagcttgcgcggccctcgcggcggcatcatcttg
atgaaggccgagcacgaaaaagccatcaacagcgccatcttccctggcctgcaaggcggc
ccgctgatgcatgtcatcgccgccaaggcggtggctttcaaagaagccatgcagcctgag
ttcaaagagtaccaagcccaggtggtgaagaacgccaagatcgtggctgaaacgttgaca
gcgcgcggtctgcgcatcgtgagcggcggcactcaaagccatgtgatgttggtggacttg
cgctccaagaagatcaccggcaaagaagccgaggctgctttaggcgctgcgcacatgacg
atcaataagaacgccattccgaacgatccagagaaacctttcgtcaccagcggtgtgcgt
atcggtacacctgcaatgacaacgcgtggtttcaaagacgaggaagctcgcatcacagcc
aacttgattgctgacgtgctggacaacccacacgacgaagccaacattgctgcggtgcgt
gccaaggtgcatgcgctgacttctaagtttcctgtttacaagtaa
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