KEGG   Limnohabitans sp. TEGF004: LTEGF4_15660
Entry
LTEGF4_15660      CDS       T11140                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
limt  Limnohabitans sp. TEGF004
Pathway
limt00740  Riboflavin metabolism
limt01100  Metabolic pathways
limt01110  Biosynthesis of secondary metabolites
limt01240  Biosynthesis of cofactors
limt02024  Quorum sensing
Module
limt_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:limt00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    LTEGF4_15660 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    LTEGF4_15660 (ribD)
Enzymes [BR:limt01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     LTEGF4_15660 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     LTEGF4_15660 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: BDU55885
LinkDB
Position
1659054..1660157
AA seq 367 aa
MTFSAHDTPHMTSALALAREALFLTSPNPRVGCVIVGADGAVLGSGHTQRAGEAHAEVMA
LRDAQAKNIDVKGATAYVTLEPCSHQGRTGPCCDALIDAGLARVVVAEGDPNSHVAGQGI
ARLRAAGVQVDVGLLGEEAHELNIGFFKRMTHGTPWVRMKVAASLDGQTALENGVSQWIT
SAPARDDGHAWRARACAVLTGIGTVLEDDPQLDVRAVPTPRQPTLVVMDSQLETPLTAKL
FKPQRPVWIYCAVDNAERRQALETKGAKVICLPNSSGKVDLVAMLKDLGQKQINEVHVEA
GNKLNGSLLREGLVDELLTYLAPKLMGQGRGMTNLGPFTSLDDSKALAFQEVTQIGPDLR
ILARLGR
NT seq 1104 nt   +upstreamnt  +downstreamnt
atgactttttcagcgcacgacaccccccacatgacaagcgccttggccttagcgcgcgag
gctttgtttttgacctcgcccaacccccgcgtgggctgcgtcatcgtgggtgctgatggc
gcagtgctgggcagcggccacacgcaacgcgcaggcgaagcccacgccgaagtgatggcc
ttacgtgatgcgcaagctaaaaacatcgacgtcaaaggcgccacggcctatgtgacgctg
gagccctgcagccaccaaggccgcaccggcccctgttgcgatgcactcatcgatgcaggc
ttggctcgcgtggtggtggccgaaggtgaccccaactcacacgtggcaggccaaggcatt
gcacgcttgcgtgcagcaggcgtgcaggtggacgtgggcttgcttggcgaagaagcgcac
gaactcaacatcggttttttcaaacgcatgacccacggcaccccctgggtgcgcatgaaa
gtggcagcatcgctcgacgggcaaactgcgttagagaacggcgtgagccagtggatcacc
tcggcccccgcgcgtgacgatggccatgcatggcgtgcccgcgcatgcgctgtgctcaca
ggcatcggcaccgttttggaagacgacccgcaactcgatgtgcgcgccgtgcccacccca
cgccagcccacgctggtggtgatggacagccagctcgaaacgcccctcacggccaagctc
ttcaaaccgcaacgccctgtttggatttactgcgccgtcgacaacgccgagcgtcgccaa
gcccttgagaccaaaggcgcaaaggtcatttgcctacccaactcatcaggcaaagtcgac
ctagttgccatgctcaaagacctcggtcaaaagcaaatcaacgaagtgcatgtggaagcg
ggcaacaaactcaatggctctttgttgcgtgaaggcttggtggatgagctgctcacctac
ctcgcacccaagctcatgggtcaaggtcgcggcatgacaaatttggggcctttcacgagt
ttggacgattccaaagccctcgcgtttcaagaagtgacacaaatcggtcctgatttaagg
atattggcccgcctcggccggtaa

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