Limnohabitans sp. TEGF004: LTEGF4_16170
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Entry
LTEGF4_16170 CDS
T11140
Name
(GenBank) C4-dicarboxylate ABC transporter
KO
K11688
TRAP-type transport system periplasmic protein
Organism
limt Limnohabitans sp. TEGF004
Pathway
limt02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
limt00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LTEGF4_16170
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
limt02000
]
LTEGF4_16170
Transporters [BR:
limt02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LTEGF4_16170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
Motif
Other DBs
NCBI-ProteinID:
BDU55936
LinkDB
All DBs
Position
complement(1704561..1705598)
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AA seq
345 aa
AA seq
DB search
MKTRFLKVAAAAAFTAAALGQAASAQEVTLKVHHFLPASSYAQTLFIQPWCDRIAKESNN
KMKCQIYPSMQLGGSPPQLFEQARDGVADVVWTLPGYTAGRFPSVEVFEMPFMMQSPEAT
SKAVWDYVDQYAKAEFKDVKALAYHVHGDGVFHMVNKPIRTAADLKGVKLRAPTRATNKF
IAMLGATPVSMPVPQVGDALSKGVIDGAVVPYEVVPAVKIQELVKFHSETDPAEPAFYTS
VFIFAMNQAKYDSLSPELKKVIDRNSGQALSGMAGKAFFEADAEGKKLTTKNTTNVIPKA
ELENWKKLSQPLFDAWVSDMNAKGHNGKQMLDGAKSLIAKHAAGK
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaagactcgttttctcaaagttgcagccgctgccgcgttcaccgcagcagccttaggc
caagcagcatcggcccaagaagtgacgctcaaagtgcaccacttcttgcccgcttcgtcc
tacgcacaaaccttgttcattcaaccttggtgtgaccgcatcgccaaagagtccaacaac
aagatgaagtgccagatttacccatccatgcaattgggtggctcgccccctcagttgttt
gaacaagcacgtgacggtgtggctgacgtggtgtggacactgcctggctacacagcaggc
cgcttcccctcggtggaagtgtttgaaatgcccttcatgatgcaaagcccagaagccacc
agcaaagcggtgtgggactacgtggaccaatatgccaaagctgagttcaaagacgtcaaa
gcgctggcctaccacgtccacggtgacggcgtgtttcacatggtcaacaagcccatccgc
actgccgctgatttgaagggtgtgaagctgcgcgctccgacacgtgccaccaacaagttc
atcgccatgttgggcgcaacccctgtgagcatgccagtgcctcaagtgggtgacgcgttg
tccaaaggcgtgatcgatggtgctgtggtgccttacgaagtggtgcccgcggtaaagatt
caagagttggtgaagttccactctgagactgacccagctgagccagccttctacacctct
gtgttcatcttcgcgatgaaccaagccaagtacgactcgttgtcgcctgagctgaagaaa
gtgattgaccgcaacagtggtcaagcgttgtcgggtatggccggcaaggcgttcttcgag
gctgatgcggaaggcaagaagctgaccaccaagaacacgaccaacgtgattccaaaggct
gagttggagaactggaaaaagttgtcacaacctttgtttgatgcctgggtgtcagacatg
aacgccaaaggccacaacggcaagcaaatgctcgatggtgcaaagtctttgattgccaag
cacgctgcaggcaagtaa
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