Limnohabitans sp. TEGF004: LTEGF4_17470
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Entry
LTEGF4_17470 CDS
T11140
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
limt Limnohabitans sp. TEGF004
Brite
KEGG Orthology (KO) [BR:
limt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
limt03032
]
LTEGF4_17470 (gyrA)
03400 DNA repair and recombination proteins [BR:
limt03400
]
LTEGF4_17470 (gyrA)
Enzymes [BR:
limt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LTEGF4_17470 (gyrA)
DNA replication proteins [BR:
limt03032
]
Prokaryotic type
DNA Topoisomerases
LTEGF4_17470 (gyrA)
DNA repair and recombination proteins [BR:
limt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LTEGF4_17470 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
BDU56066
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Position
1832855..1835542
Genome browser
AA seq
895 aa
AA seq
DB search
MTQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMHELNNDWN
RPYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSLRHMLVDGQGNFGSVDGDNAAAM
RYTEIRLSKIAHEMLSDIDKETVDFGPNYDGSEKEPLVLPSRIPNLLVNGSSGIAVGMAT
NIPPHNLNEVVDACLHMLRNPEATIDELMEIIPAPDFPTAGIIYGISGVKDGYRTGRGRV
VMRAKCHFEDIDKGQRQSIIVDELPYQVNKKTLQERMAELVHEKKIEDISHIQDESDKSG
MRLVIELKRGAVPEVVLNNLYKQTQLQDTFGINMVALIDGQPKLCNLRDLIAVFLGHRRE
VVTRRTIFTLRKARERGHVLEGLAVALANIDEFIRIIRNAPTPPVAKAELMTKSWDSQLV
REMLTRSRADGGVINADDYRPDGLEKEFGMGNDGLYRLSDTQAQEILQMRLQRLTGLEQD
KIVNEYKDVMAEIDDLLDILAKPERVSTIIGDELTVVKNEFGQSKLGARRSVIEHNAQDL
GTEDLITPTDMVVTLSHSGYIKSQPLSEYRAQKRGGRGKQATATKEDDWVDQLFIANTHD
YLLCFSNRGRLYWLKVWEVPAGSRGSRGRPIVNMFPLQEGEKINVVLALTGEARTFPEDQ
FVFMATSMGTVKKTSLDEFNNPRKGGIIAVNLDEGDFLVGAALTDGKHDVMLFSDGGKAV
RFDENDVRPLGRSARGVRGMMIEEGQSVIAMLVSEQEDPAAVTDETVARASVLTATENGY
GKRTNISEYTRHGRGTKGMIAIQQSERNGKVVAATLVQADDEIMLITDTGVLVRTRVAEI
REMGRATQGVTLIGLDEGAKLSGLQRIVENDANAHFSEGAEDDNAEGSTDAPSEG
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgacccagttcgccaaagaaaccttgcccatcagcctagaagaggagatgcgtcgcagc
tacctagattacgccatgagcgtgattgtgggccgcgccctccccgatgcgcgtgacggc
ttaaagcctgtgcaccgccgcgtcttgttcgcgatgcacgagctcaacaacgactggaac
cgtccttataagaagtcagcccgtatcgtgggtgacgtgattggtaaataccatccgcac
ggcgacagcgcggtgtacgacaccatcgtgcgtatggcccaagacttttcgttgcgccac
atgttggtggacggccaaggtaacttcggctcggtcgatggcgacaacgcagcggcgatg
cgttacacggaaattcgcttatccaagatcgctcacgaaatgttgagcgacatcgacaaa
gaaactgtcgacttcggacctaactacgacggctctgaaaaagaaccgttggtgctaccc
agccgcattcctaatttgctggtcaacggctcctccggcattgccgtgggtatggccacc
aacatcccgccccacaacctgaacgaagtggtggatgcgtgtttgcacatgctgcgcaac
ccagaagccaccattgacgagttgatggaaatcatcccagcgcctgacttccccactgcc
ggcattatttacggcatcagtggtgtcaaagatggctaccgcacaggccgcggccgtgtg
gtcatgcgcgccaagtgccactttgaagacatcgacaaaggccaacgccagtccatcatc
gtggacgagttgccttaccaagtgaacaaaaagaccttgcaagaacgcatggccgaattg
gttcacgagaagaagattgaagacatcagccacatccaagacgagtccgacaagtcgggc
atgcgcttggtgattgaactcaagcgtggtgccgtgcctgaggtggtgttgaacaacctg
tacaaacaaacccagctgcaagacaccttcggtatcaacatggtggccttgattgacggc
caacccaagttgtgcaatttgcgcgacctgattgccgtgttcttgggtcaccgccgcgaa
gtggtgacacgccgcaccatctttaccctgcgcaaagcccgcgaacgcggccatgtgctg
gaaggcttggctgtggcattggccaacatcgacgagttcatccgcatcatccgcaacgcg
cctacgccccctgtggccaaggctgagttgatgaccaagtcctgggacagccaactggtg
cgcgaaatgctcacccgcagccgtgccgatggcggcgtgatcaacgccgacgactaccga
cccgatggcttggaaaaagaattcggcatgggcaacgacggcctgtaccgcttgagcgac
acccaagcacaagaaattctgcaaatgcgtctgcaacgcttgacgggtcttgagcaagac
aagatcgtcaacgaatacaaagacgtcatggccgagatcgatgacttgctcgacatcttg
gccaagcctgagcgtgtgtccaccatcattggtgacgagctgaccgtggtgaaaaatgaa
ttcggccaaagcaagctcggcgcacgccgcagcgtgattgagcacaacgcccaagactta
ggtaccgaagacctgatcacgcccaccgacatggtggtcacgctcagccacagcggctac
atcaagagtcaacctctatctgaataccgcgcacaaaaacgcggcggtcgcggcaagcaa
gccacagcgaccaaagaagacgattgggtggaccaactcttcatcgccaacacgcacgac
tatttgctgtgcttctctaaccgtggccgtttgtactggctcaaagtatgggaagtgcct
gcgggctcacgcggttcacgcggtcgccccatcgtcaacatgttcccgcttcaagaaggc
gaaaaaatcaacgtggtcttagccctcaccggcgaagcacgcaccttccctgaagaccaa
tttgtgttcatggccacgtccatgggcacggtcaagaagacctcgctcgacgagttcaac
aacccacgcaagggcggcatcatcgccgtcaacttggatgaaggtgatttcttggttggt
gctgccctcaccgacggcaagcacgacgtgatgttgttcagcgacggcggcaaagccgtg
cgctttgacgaaaacgatgtgcgccccttgggtcgcagtgcccgcggcgtgcgcggcatg
atgatcgaagaaggccaaagcgtcatcgccatgttggtgtctgaacaagaagatccagca
gcagtgactgacgaaaccgtggcccgcgccagcgtgttgaccgccaccgaaaacggctac
ggcaaacgcaccaacatcagcgaatacacccgccacggccgtggcaccaaaggcatgatt
gccatccagcaatctgagcgcaacggcaaagtcgtggcagctaccttggtgcaagcggac
gacgagatcatgctcatcaccgacaccggcgtgctggtccgtacccgcgtggctgagatt
cgtgaaatgggccgcgccacacaaggcgtgaccttgatcggtttggacgaaggcgccaag
ctcagcggcttgcaacgcatcgtcgaaaacgatgccaatgctcacttcagcgaaggcgct
gaagacgacaacgctgaaggcagcactgacgccccaagcgaaggctaa
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