Limnohabitans sp. TEGF004: LTEGF4_17530
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Entry
LTEGF4_17530 CDS
T11140
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
limt Limnohabitans sp. TEGF004
Brite
KEGG Orthology (KO) [BR:
limt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
limt03032
]
LTEGF4_17530 (ihfB)
03036 Chromosome and associated proteins [BR:
limt03036
]
LTEGF4_17530 (ihfB)
03400 DNA repair and recombination proteins [BR:
limt03400
]
LTEGF4_17530 (ihfB)
DNA replication proteins [BR:
limt03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LTEGF4_17530 (ihfB)
Chromosome and associated proteins [BR:
limt03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
LTEGF4_17530 (ihfB)
DNA repair and recombination proteins [BR:
limt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
LTEGF4_17530 (ihfB)
BRITE hierarchy
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Gene cluster
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Other DBs
NCBI-ProteinID:
BDU56072
LinkDB
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Position
1842610..1842927
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AA seq
105 aa
AA seq
DB search
MTRSDLVEELAARFGQLTHRDAEFAVKTLLDAMSDALVRGHRIELRGFGSFSINRRPPRM
GRNPRSGESVAIPEKRVPHFKPGKALREAVDTRTQELLAGSAPKG
NT seq
318 nt
NT seq
+upstream
nt +downstream
nt
atgacccgttcagacctggtcgaagaactggctgcccgctttgggcagctcacgcaccgc
gatgccgagttcgctgtcaagacgcttcttgacgcgatgagcgacgcgctggtgcgcggg
caccgcattgagttgcgaggctttggcagtttttcgatcaaccgtcgcccgcctcgcatg
ggacgcaacccgcgttccggcgaaagcgtggcgattcctgagaaacgtgtgcctcatttc
aagccgggtaaagccctgcgcgaagcggtggacacacgcactcaagaattgttggcgggg
tctgcacccaaaggttga
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