Limnohabitans sp. TEGF004: LTEGF4_18040
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Entry
LTEGF4_18040 CDS
T11140
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
limt Limnohabitans sp. TEGF004
Pathway
limt03420
Nucleotide excision repair
limt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
limt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LTEGF4_18040
03430 Mismatch repair
LTEGF4_18040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
limt03400
]
LTEGF4_18040
Enzymes [BR:
limt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LTEGF4_18040
DNA repair and recombination proteins [BR:
limt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LTEGF4_18040
MMR (mismatch excision repair)
Other MMR factors
LTEGF4_18040
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
BDU56123
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Position
complement(1892376..1894760)
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AA seq
794 aa
AA seq
DB search
MHFSPDTSPLLQGLNNEQAAAVTLPQAHALILAGAGSGKTRVLTTRIAWLMQTGQVSPGG
ILAVTFTNKAAKEMLTRLSAMLPVSVRGMWVGTFHGLCNRFLRAHWKLANLPQSFQILDT
QDQLSAIKRLSKQFNVDDERFPPKETMRFIAGCKEDGLRPKDVVARDPDDRKRVELYELY
EAQCQREGVVDFGELMLRSYELLRDNDPLREHYRRRFQHILVDEFQDTNKLQYAWLKQLA
GPVDQGGGAILAVGDDDQSIYAFRGARVGNMADFVREYNVTHQIKLEQNYRSFSNILDSA
NHLISHNKGRLGKNLHTTQGAGEPVRVYESPTDFAEAQWMVEEMKQLLRDGQNGDGTNGV
QHRSEIAVLYRSNAQSRVIETALFNAAMPYRVYGGLRFFERAEIKHALAYLRLLENPRDD
TSFMRVVNFPPRGIGARSIEQLQDASRAMGCAMSDAVTAVAGKAGTNLSAFVAKIDVLRE
QTQGQNLRQIIELLLDHSGLITHYQGEREGQDRIENLQELVNAAESFVTQEGFGRDAVAL
PIDEHGQPVVTDGTEPAAPQTMINADTGETLSPLAAFLTHAALESGDNQAQAGQDAIQLM
TVHASKGLEFDCVFITGMEEGLFPHENSMNDFDGLEEERRLMYVAITRARKRLYLSHSQT
RMLHGQTRYNLKSRFFEELPEHTMKWITPARSAFADAMPSRRDAWQNNNGWQNNAWGGGA
ATAAAPKPVPQRAAPVTSGPNAWVRSGVQVFHAKFGEGAVISIEGVGDDARAQVNFPRHG
IKWLALSVAKLTQV
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgcatttttcacccgatacctcgcccttgctccaaggcctcaacaacgagcaagccgcc
gcagtcacgctgccgcaggcgcatgccctcatcttggcgggggcggggtcgggtaagacg
cgggtgctgaccacgcgcattgcgtggctcatgcaaaccgggcaggtgtcgccaggcggc
atcttggcggtgacgtttaccaacaaggccgccaaagaaatgctcacgcgtttgtcggcc
atgctgcctgtgagcgtgcgcggcatgtgggtgggcaccttccacgggttgtgcaaccgc
tttttacgcgcccactggaagctggccaatttgccccagtcttttcaaatcttggacacc
caagaccagctcagcgccatcaagcgcttgagcaaacagttcaatgtggatgacgagcgt
tttccacccaaagaaaccatgcgtttcattgccggttgcaaagaagatggcctgcgcccc
aaagatgtggtggcccgtgatcctgatgaccgcaagcgtgttgagttgtacgagctgtac
gaagcccaatgccaacgcgaaggtgtggtggactttggggaactcatgctgcgctcatac
gaactgctgcgcgacaacgatccgctgcgtgagcactatcgccgccgctttcagcacatt
ttggtggacgagtttcaagacaccaacaagctgcaatacgcctggctcaaacaactcgct
ggccctgtggaccaaggtggcggtgccatcttggcggtgggtgacgatgaccaaagcatt
tacgccttccgtggcgcacgcgtgggcaacatggccgactttgtgcgtgagtacaacgtc
acgcaccaaatcaagctcgagcaaaactaccgcagcttcagcaacattttggacagtgcc
aaccacctcatcagccacaacaaaggccgcttgggtaaaaacctgcacaccacgcagggc
gcaggcgagcccgtgcgtgtgtatgaatcgcccacagactttgccgaagcgcaatggatg
gtggaagaaatgaagcaactcttgcgcgatggccaaaacggtgatggcacgaatggcgtg
caacaccgcagcgagattgccgtgctgtaccgcagcaacgcacaaagccgtgtgattgaa
accgcgttgttcaacgccgccatgccgtaccgcgtgtacggtggtttgcgcttctttgag
cgcgctgaaatcaaacacgccttggcctatttgcgcttgttagaaaacccacgcgacgac
accagcttcatgcgcgtggtcaacttcccgccgcgtggcattggcgcgcgcagcatcgaa
cagttgcaagacgcctcgcgagccatgggctgtgccatgagcgacgccgtcactgctgtg
gcaggcaaagctggtaccaacctcagcgcctttgtggccaagattgatgtgttgcgcgag
caaacacaaggccaaaacctgcgccaaatcattgagctgttgctcgaccactcaggcctc
atcacgcattaccaaggcgaacgcgaaggccaagaccgcattgaaaacttgcaggaattg
gttaacgctgccgagagcttcgtcacacaagaaggctttggccgcgatgccgtggccttg
cccatcgatgaacacggtcagcctgtggtgacggatggcactgaacccgcagcgccgcaa
accatgatcaatgccgacaccggcgaaaccttgtcgcccttggccgccttcctcacgcac
gccgcgttggagtcgggcgacaaccaagcgcaagcgggtcaagacgcgattcagctgatg
acggtgcacgcatccaaaggtttggagtttgactgcgtgttcatcacgggcatggaagag
ggcttgttccctcacgaaaactcgatgaacgattttgatggcctggaagaagagcgccgc
ctcatgtacgtggccatcacgcgtgcgcgcaaacgtttgtatctgagccattcacaaacc
cgtatgttgcatggccaaacgcgctacaacctgaaaagccgtttctttgaagaactgcca
gagcacaccatgaagtggatcacgcctgcgcgttcagcgtttgcagatgcgatgccctca
cgccgcgatgcatggcagaacaacaacggctggcaaaacaacgcatggggtggcggtgca
gccaccgctgcggcgccaaagcctgttcctcaacgtgcagcccctgtgaccagtggccct
aatgcatgggtgcgcagcggtgtgcaggtgttccacgccaagtttggcgagggtgcggtc
atcagcattgaaggcgtgggcgacgatgcccgtgcacaagtgaacttcccgcgtcacggc
atcaagtggttggcgctgagtgtggccaagctcacgcaggtttga
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