Limnohabitans sp. TEGF004: LTEGF4_18180
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Entry
LTEGF4_18180 CDS
T11140
Symbol
rsgA
Name
(GenBank) putative ribosome biogenesis GTPase RsgA
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
limt Limnohabitans sp. TEGF004
Pathway
limt00730
Thiamine metabolism
limt01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
limt00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
LTEGF4_18180 (rsgA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
limt03009
]
LTEGF4_18180 (rsgA)
Enzymes [BR:
limt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
LTEGF4_18180 (rsgA)
Ribosome biogenesis [BR:
limt03009
]
Prokaryotic type
GTPases
LTEGF4_18180 (rsgA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
GTP_EFTU
MMR_HSR1
AAA_29
ABC_tran
Septin
nSTAND1
AAA_16
AAA_7
AAA_23
Dynamin_N
AAA_28
AAA_22
SRPRB
DUF5906
AAA
AAA_19
Rad17
cobW
AIG1
HTH_ParB
RsgI_N
P-loop_TraG
FtsK_SpoIIIE
AAA_24
T2SSE
PPV_E2_C
nSTAND3
AAA_30
AAA_18
SMC_N
AAA_21
AAA_33
VapE-like_dom
RNA_helicase
TniB
DUF815
Guanylate_kin
RsgA_N
Motif
Other DBs
NCBI-ProteinID:
BDU56137
LinkDB
All DBs
Position
1907129..1908016
Genome browser
AA seq
295 aa
AA seq
DB search
MKQSGLVVASHGRHCVVETPDGERRICHPRGKKSQVVVGDRVQWLASTDEGTIEKVEPRH
NLFYRQDEIRTKSFAANLDQVLILLAAEPEFSEMQLTRALIAAEAEHIKPLIVLNKRDLT
ELHARALARLEPYVKMGYTVLQGAFKSGDLGDLPERLKHKTTLVLGPSGTGKSTLINALV
PNANVATAEISQALNSGKHTTTSTTWHWVDAERKTGLIDSPGFQEFGVHHIDAMQLAAYM
PDFKPHVANCKFYNCTHLHEPSCGVQDAVAAGAISPSRYKLYGMLFAELTQPVNY
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaagcggcttagtggtagccagccacggacgacactgcgtggtggagacgccc
gatggcgaacgacgcatttgccacccgcgaggcaagaaaagccaggtggtcgtgggcgat
cgtgtgcaatggttggccagcaccgacgaaggcacgattgaaaaagtggagcctcgccac
aacttgttttaccgacaagacgagattcgcaccaagtcattcgcagccaacttagaccaa
gtgttgattctgttggcggctgagccagagttctctgaaatgcagctcacgcgtgctttg
attgctgcggaagccgaacatatcaagcccctcatcgtgctcaacaagcgtgacttgacc
gagttgcatgcccgcgccctcgcccgcttagagccttatgtgaagatgggctataccgtg
ctgcaaggtgcctttaaatcgggtgatttaggcgacttgcctgaacgcctaaaacacaaa
accaccttggtgcttgggccctcaggcacaggcaaaagcacgctcatcaacgcccttgtg
cccaacgccaatgtggccactgcagagatttcgcaagcactcaattcaggcaaacacacc
accacatcaaccacctggcactgggtcgatgctgagcgcaaaacaggattgattgactca
ccaggctttcaagagtttggggtgcatcacattgatgccatgcagttggcggcctacatg
ccagacttcaaaccgcatgtggcgaactgcaagttttacaactgcacgcatttgcacgaa
ccttcgtgcggggtacaagacgcggtagcagctggggccatcagcccatcgcgctacaag
ctgtacggcatgttgtttgccgagctcacacagcctgtgaattactag
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