Limnohabitans sp. TEGF004: LTEGF4_18520
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Entry
LTEGF4_18520 CDS
T11140
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
limt Limnohabitans sp. TEGF004
Pathway
limt00020
Citrate cycle (TCA cycle)
limt00190
Oxidative phosphorylation
limt00650
Butanoate metabolism
limt00720
Other carbon fixation pathways
limt01100
Metabolic pathways
limt01110
Biosynthesis of secondary metabolites
limt01120
Microbial metabolism in diverse environments
limt01200
Carbon metabolism
Module
limt_M00009
Citrate cycle (TCA cycle, Krebs cycle)
limt_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
limt_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
limt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LTEGF4_18520 (sdhA)
00650 Butanoate metabolism
LTEGF4_18520 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
LTEGF4_18520 (sdhA)
00720 Other carbon fixation pathways
LTEGF4_18520 (sdhA)
Enzymes [BR:
limt01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
LTEGF4_18520 (sdhA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Pyr_redox_2
HI0933_like
Thi4
FAD_binding_3
GIDA
FAD_oxidored
Pyr_redox_3
NAD_binding_7
ThiF
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
BDU56171
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Position
1936936..1938732
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AA seq
598 aa
AA seq
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MTVKSSIPRRKFDVVIVGAGGSGMRASLQLARAGLNVAVLSKVFPTRSHTVAAQGGIGAS
LGNMNEDNWHYHFYDTVKGSDWLGDQDAIEYMCREAPKVVYDLEHMGMPFDRNPDGTIYQ
RPFGGHTANYGEKAVERACAAADRTGHAMLHTLYQQNVKAKTSFFVEWMALDLIRDDAGD
VVGVTALEMETGELYIMEAKTVLLATGGAGRIFAASTNAFINTGDGLGMAARAGIPLEDM
EFWQFHPTGVAGAGVLLTEGCRGEGAILRNCNGERFMERYAPAYKDLAPRDYVSRCMDQE
IKEGRGCGPNKDYINLDMTHLGADTIMKRLPSVFEIGHNFANVDITKEPIPVIPTIHYQM
GGIPTNINGQVVTQNANNESVVVNGLYAVGECSCVSVHGANRLGTNSLLDLLVFGRAAGN
HIVEFNQKNKEHKPLPANAADVTLARLARLEANQTGEYAQDVANDIRDAMQSHASVFRTQ
ALMDEGVKQIAALRERVNNIGLKDNSKVFNTARIEALEVENLIEAAQATMVSAAARHESR
GAHTVNDYGDTPEHPNGRNDQDWHKHTLWHKEGNKLTYKPVQMKPLTVDSIPLQTRTF
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgacagttaaaagctctatcccacgtcgtaaatttgatgtggtcatcgtcggagccggc
ggctctggcatgcgcgcatcgttgcaacttgctcgcgcaggtttgaacgtggccgtgttg
tccaaagtgttccccacacgttcacacaccgtggctgctcaaggcggcattggcgcgtct
ttgggcaacatgaacgaagacaactggcactaccacttctatgacaccgtcaaaggctcc
gactggctcggcgaccaagacgcgattgaatacatgtgccgtgaagcccccaaagtcgtt
tacgacttggaacacatgggcatgcctttcgaccgcaacccagacggcaccatttaccaa
cgccccttcggcggccacaccgccaactacggcgaaaaggctgtggagcgcgcttgtgct
gcggctgaccgtaccggtcacgccatgttgcacacgctgtaccaacaaaacgtcaaagcc
aaaaccagcttcttcgtggagtggatggccctcgacctgatccgcgatgacgcaggtgat
gtggtcggcgtgaccgccctcgagatggaaactggcgagctctacatcatggaagcaaaa
accgtgttgttggccaccggtggtgcaggccgcatttttgctgcttcgaccaacgcgttc
atcaacaccggcgacggcctcggcatggcagcacgcgctggcatcccactcgaagacatg
gaattctggcaattccaccccactggcgtggccggtgctggcgtgttgttgaccgaaggc
tgccgtggcgaaggcgcgattttgcgcaactgcaatggcgagcgcttcatggagcgttat
gcccccgcctacaaagacttggccccacgcgactacgtgtcacgctgcatggaccaagag
atcaaagaaggtcgcggctgcggtcccaacaaggactacatcaacctcgacatgacccac
ttgggtgctgacaccatcatgaagcgtttgccttcggtgttcgaaattggccacaacttt
gccaacgtcgacatcaccaaagagccaatcccagtgatccccaccatccattaccaaatg
ggcggcatccccaccaacatcaacggccaagttgtgacgcaaaacgccaacaacgaaagc
gttgtggtgaatggtttgtacgctgtgggtgaatgctcttgcgtgtcagtgcacggcgct
aaccgcttgggcaccaactccttgctcgacttgttggtgttcggccgcgcagctggtaac
cacattgttgaattcaaccaaaagaacaaagagcacaagcctctgccagccaacgcggct
gacgtgaccttggctcgtttggctcgtttggaagccaaccaaactggcgaatatgcacaa
gacgtggccaacgacatccgtgatgccatgcagtcacacgccagcgtgttccgcacacag
gcgttgatggacgaaggcgtgaagcaaatcgcagccctgcgcgagcgcgtaaacaacatt
ggtttgaaagacaactccaaagttttcaacaccgcacgcatcgaagccttggaagttgaa
aacttgatcgaagccgcacaagccacgatggtttctgctgctgctcgtcacgaaagccgc
ggcgctcacacagtcaacgactacggcgacacgcccgagcatccaaacggccgtaacgac
caagactggcacaagcacaccctgtggcacaaagaaggcaacaagctgacttacaagccc
gtgcaaatgaagcctttgactgtcgacagcatcccgctgcagacccgtactttctga
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