Limnohabitans sp. TEGF004: LTEGF4_19190
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Entry
LTEGF4_19190 CDS
T11140
Symbol
ctaD
Name
(GenBank) cytochrome c oxidase subunit 1
KO
K02274
cytochrome c oxidase subunit I [EC:
7.1.1.9
]
Organism
limt Limnohabitans sp. TEGF004
Pathway
limt00190
Oxidative phosphorylation
limt01100
Metabolic pathways
Module
limt_M00155
Cytochrome c oxidase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
limt00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
LTEGF4_19190 (ctaD)
Enzymes [BR:
limt01000
]
7. Translocases
7.1 Catalysing the translocation of protons
7.1.1 Linked to oxidoreductase reactions
7.1.1.9 cytochrome-c oxidase
LTEGF4_19190 (ctaD)
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Gene cluster
GFIT
Motif
Pfam:
COX1
Flavi_NS4B
Motif
Other DBs
NCBI-ProteinID:
BDU56238
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Position
complement(1997417..1999033)
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AA seq
538 aa
AA seq
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MSAVLDSHGHGHDDHHGAPHGWRRWVYATNHKDIGTLYLLFAFTMLIIGGVLALLIRAEL
FQPGLQLVNPELFNQLTTMHGLIMVFGAIMPAFVGFANWMIPLQIGASDMAFARMNNFSF
WLMIPAAAMLAGSFFMPGGAPAAGWTLYAPLTLQMGPSMDAGIFAMHVLGASSIMGSINI
IVTVLNMRAPGMTLMKMPMFVWTWLITAYLLIAVMPVLAGAITMTLTDRHFGTTFFNPAG
GGDPIMYQHIFWFFGHPEVYIMILPAFGIISHIVPAFARKKLFGYASMVYATSSIAILSF
IVWAHHMYATGMPVTGQLFFMYATMLISVPTGVKVFNWIATMWRGSMTFETPMLFAVGFI
FVFTMGGFTGLILSMAPIDTQVQDTYYVVAHFHYVLVAGSLFAMFAGFYYWCPKWTGVMY
NETRGQIHFWWTLISFNVTFFPMHFLGLAGMPRRYADYPMQFADFNAVASIGAFFFGFAQ
VYFFLFVVLPAMRGHGEKAAAKPWEAAEGLEWEVPSPAPFHTFETPPKLDATATRVIG
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcagtactcgattctcacggccacggtcacgatgaccaccacggcgcgcctcac
ggctggcgtcgttgggtgtacgccaccaaccacaaagacattggtactttgtacctgttg
ttcgctttcaccatgctgatcatcggtggcgtcttggcgctgttgattcgcgctgagctg
ttccagcccggcttgcagttggtcaaccccgagttgttcaaccagctcaccaccatgcat
ggactcatcatggtgttcggcgccatcatgcccgccttcgtgggttttgcgaactggatg
attccgttgcaaatcggcgcgtctgacatggcctttgcccgcatgaacaacttcagcttc
tggttgatgattcctgcggctgccatgttggcgggctcgttctttatgccaggtggtgca
cccgctgcgggttggacgctttatgcaccgctgaccctgcaaatgggcccctccatggac
gctggtatttttgccatgcacgtgttgggtgcgtcgtccatcatgggttccatcaacatc
atcgtgaccgtgctgaatatgcgcgcgccaggcatgaccttgatgaagatgccgatgttt
gtctggacttggttgatcacggcttacttgttgatcgctgtcatgcccgtgttggctggc
gcgatcaccatgacgctgacagaccgccactttggcacgaccttcttcaaccccgctggc
ggcggtgaccccatcatgtaccagcacatcttctggttcttcggtcacccagaggtgtac
atcatgatcttgccggccttcggcatcatcagccacatcgtgcccgcatttgctcgcaag
aaattgtttggttatgcctccatggtgtatgccacatcgtcgatcgcgattttgtcgttc
atcgtttgggcacaccacatgtatgccacaggcatgcctgtgaccggccagttgttcttc
atgtacgccacgatgttgatctctgtgcccacaggcgtgaaggtgttcaactggattgcc
accatgtggcgcggctccatgacgtttgaaacacccatgttgtttgctgtgggcttcatc
tttgtgttcaccatgggtggtttcacgggcctgatcctgtcgatggcgccgattgatacg
caggtgcaagacacctactacgtggtggctcacttccactatgtgctggtggcgggttcg
ttgtttgccatgttcgctggcttctactactggtgccccaagtggaccggcgtgatgtac
aacgaaacgcgcggtcagattcacttctggtggaccttgatttcgttcaacgtcacgttc
ttcccgatgcacttcttgggtctggctggcatgcctcgtcgctacgctgactaccccatg
cagtttgctgacttcaatgcagtggcatcgatcggtgcgttcttcttcggttttgcgcag
gtgtacttcttcttgtttgtggtgttgccagcgatgcgcggtcacggcgagaaagcggct
gccaagccttgggaagcggctgaaggtttggaatgggaagtgccttcacctgcacctttc
cacacctttgagaccccacccaagctggatgccacagcaactcgcgtgattggttga
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