Limnohabitans sp. TEGF004: LTEGF4_20040
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Entry
LTEGF4_20040 CDS
T11140
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
limt Limnohabitans sp. TEGF004
Pathway
limt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
limt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LTEGF4_20040 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
limt03400
]
LTEGF4_20040 (recO)
DNA repair and recombination proteins [BR:
limt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LTEGF4_20040 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LTEGF4_20040 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
BDU56323
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Position
complement(2071750..2072517)
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AA seq
255 aa
AA seq
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MSRGIPRIQDEPAFVVHRYDWSESSLILETFTRHFGRVALVAKGAKKPSSNFRPVLLPLQ
PLYVSYSGDAEIRTLKGAEWVGGHIMPTGEALLSGYYINELLLRLLARDDPHPSLFDLYR
QVVQVLASGHEGTIAPALRAFELLLLRDIGFLPELNAQTLTLSPLQPDALYVLVAEGGLR
THNAQDRTGLAGGVWLQLHDSLSTDSPFTATLRLCAEMPPEQRNALQGQLRALLHYHCGV
KTLRTRQMMIDLQSL
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggggcattccccgcattcaggacgagcccgcgttcgtggtgcaccgctacgac
tggagcgagtccagtttgattttggaaaccttcacccgccactttggtcgggtggctttg
gtggccaaaggcgctaaaaaacccagctccaactttcgccctgtcttgctgcccttgcag
ccgctgtacgtcagctattcgggcgatgccgaaattcgcaccttgaagggcgctgaatgg
gtcggcggccacatcatgcccacgggcgaggcgctgctgtcgggctactacatcaacgag
ttgttgttgcgcctgctggcgcgtgacgatccgcaccccagtttgtttgacctgtaccgc
caagtggtgcaagtgctggcctcgggccacgagggcacgattgcccccgcgctgcgcgcc
tttgagctgctgctgttgcgcgacatcggcttcttgcccgagctcaacgcccaaaccttg
accctgagccctttgcagcccgacgccttgtatgtgctggtggccgaaggcggcttgcgc
acgcataacgcacaagaccgcacaggcttggctggcggcgtgtggctgcagctgcacgac
agcttgtcgacagactcgccattcaccgccacgctgcgtttgtgtgccgagatgccccca
gagcaacgcaacgccttgcagggccagctacgggccttgctgcactaccattgcggggtc
aaaacactgcgcacacggcagatgatgattgacctgcaatccctttga
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