KEGG   Limnohabitans sp. TEGF004: LTEGF4_20060
Entry
LTEGF4_20060      CDS       T11140                                 
Name
(GenBank) hypothetical protein
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
limt  Limnohabitans sp. TEGF004
Pathway
limt03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:limt00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    LTEGF4_20060
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:limt03019]
    LTEGF4_20060
   03009 Ribosome biogenesis [BR:limt03009]
    LTEGF4_20060
   03036 Chromosome and associated proteins [BR:limt03036]
    LTEGF4_20060
Enzymes [BR:limt01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     LTEGF4_20060
Messenger RNA biogenesis [BR:limt03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     LTEGF4_20060
Ribosome biogenesis [BR:limt03009]
 Eukaryotic type
  90S particles
   RNase
    LTEGF4_20060
 Prokaryotic type
  rRNA processing factors
   LTEGF4_20060
Chromosome and associated proteins [BR:limt03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     LTEGF4_20060
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase DND1_DSRM
Other DBs
NCBI-ProteinID: BDU56325
LinkDB
Position
complement(2073541..2074266)
AA seq 241 aa
MTSRSRSDRPSLSQQQILETLQARLEYTFQNPALLTQALTHRSFSSDHYERLEFLGDSVL
NLAVANMLYKQLGTLPEGDLSRVRANLVKQDTLHHLAVELGLSGILRLGEGEMNSGGQKR
PSILADALEAVLGAVYLDAGYVAADALVQRIFAKVEINPDMQAVGKDAKTELQEWLQARK
FKLPIYRVVGTLGAAHKQTFDVECEVPELARCERGIGGSRRAGEQAAAAAMLQVIKDNGL
K
NT seq 726 nt   +upstreamnt  +downstreamnt
atgacatcacgctcacgctcagaccgacccagcctgtctcaacaacaaatccttgagacg
cttcaagcgcgcttggagtacacctttcaaaaccctgcgttgctcacgcaggcgttgacg
caccgcagcttcagctctgaccactatgaacgcttggagtttttaggcgactcggtgctc
aacttggccgtggccaatatgctctacaagcagctcggcactttgcccgaaggtgatctg
tcccgcgtgcgcgccaacttggtcaagcaagacaccttgcatcacttggcagttgaactg
ggcttatctggcatcctgcgcttgggcgagggcgagatgaactcaggtggccaaaagcgc
ccctccatcttggccgatgccctcgaagctgtattgggtgcggtgtacctcgacgcaggt
tacgtggccgcagacgctttggtgcaacgcatctttgccaaggtggaaatcaaccccgac
atgcaagccgtgggcaaagacgccaaaactgaattacaagaatggctgcaagcacgcaag
ttcaagttgcccatttaccgtgtggtcggcaccttaggcgccgcgcacaaacaaacgttt
gatgtggaatgtgaagttccagaactagcccgctgcgagcgtggcattggcggctcgcgc
cgcgcaggagagcaagccgccgcagcagccatgctccaagtgattaaagacaacgggctc
aaataa

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