Limnohabitans sp. TEGF004: LTEGF4_23610
Help
Entry
LTEGF4_23610 CDS
T11140
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
limt Limnohabitans sp. TEGF004
Pathway
limt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
limt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LTEGF4_23610 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
limt03400
]
LTEGF4_23610 (ung)
Enzymes [BR:
limt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LTEGF4_23610 (ung)
DNA repair and recombination proteins [BR:
limt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LTEGF4_23610 (ung)
Prokaryotic type
LTEGF4_23610 (ung)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BDU56680
LinkDB
All DBs
Position
complement(2440676..2441476)
Genome browser
AA seq
266 aa
AA seq
DB search
MMGDLFGETLPAEVGAPHLTRWSPADWAVQSDWQPVLDAFWRSAQGMSLASFVQSRLDAG
AVVYPKHPLWALQLTPLSQVKVVILGQDPYHGPHQAQGLSFSVAPGVKIPPSLRNIFKEL
QRDLSQPAPTSGSLEAWAKRGVLLLNTSLTVEDGQPASHAKRGWEQLTDALLTEVACTAP
ACVYMLWGGHAQAKAELIERETCAQSTGFLGLRDGAPLKREALVLKANHPSPLSALRPPR
PFIGCGHFSQAKIWLAQKNLSLEWNL
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgatgggtgacttgtttggcgaaacgttgccggcagaggttggtgcgccgcatttgacc
cgttggtcgccagctgattgggctgtccagtctgattggcagcctgtgctcgatgcgttt
tggcgcagcgcacaaggcatgtcattggcaagttttgtgcaatcgcgcttagatgctggc
gcggtggtgtatcccaagcatcctttgtgggcgttgcagctgacgcctttgtcccaggtg
aaagtggtcatcttggggcaggacccttatcacgggccgcaccaagcgcaaggtttgtct
ttttcagtggcgcctggcgtcaagattccgccctcgttacgaaacattttcaaagagctt
caacgtgacttgagtcaacccgcgccaaccagtggctctttagaggcctgggccaagcgt
ggggttttgctactcaacaccagtttgacggtggaagatggccagcccgccagtcatgcc
aagcgcgggtgggagcagttgacggatgccttgttgaccgaggtggcgtgcaccgcgcct
gcgtgcgtgtacatgctctggggtggtcacgcccaagccaaggctgaattgattgagcgc
gaaacctgtgcccagtcgacaggttttctgggtttgcgtgatggcgcacctctcaaacgc
gaggctttggtgctcaaggctaaccatccctcgccgttgtcggccttgcgcccgccacgg
cccttcatcggttgcggtcatttttcgcaagccaagatttggttggcgcagaaaaacctg
agcttggaatggaatttgtga
DBGET
integrated database retrieval system
