Listeria innocua (serotype 6a): addB
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Entry
addB CDS
T00067
Name
(GenBank) similar to ATP-dependent deoxyribonuclease (subunit B)
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
lin
Listeria innocua (serotype 6a)
Brite
KEGG Orthology (KO) [BR:
lin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lin03400
]
addB
Enzymes [BR:
lin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
addB
DNA repair and recombination proteins [BR:
lin03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
addB
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
CAC97596
Pasteur:
LIN02369
UniProt:
Q929A8
LinkDB
All DBs
Position
complement(2402319..2405792)
Genome browser
AA seq
1157 aa
AA seq
DB search
MTLQIIAGKAGTGKTTHLMDEVGEKIKKTSKTYIFIVPDQMTFQMETSFLNKQNLAGMLG
TQIFSFSRLAWKILQETGGLSKTFLSQTGIEMVIRKAALDQKDKLKIFSRATSKKGFYSE
LAKLFKEMKQEEISVDELEKSAANLSTSVSSKVHDISLIYQKYEELLAGKFLENEDYLRL
LADKIIESDYLNQTEIIIDGFTSFSKQELTVIEKLMQKCDKVTVSLTLNVPEIHKGLEDF
SMFKASTEAYFALLEMAKLNKIQVEPEKILLENKRANSDSLAFLANAWGDNKYSSYEGGA
NDLTIHQANNRRAEMEGVAREIRQLALNGYRYRDIAILTRNIGDYDILCETVMESFDIPI
FIDKKRAMAKHPFIEFIRSSIDAILFNWKYEPIFQAVKTEFFFDVAENATIMRRKADILE
NYVLENGIQNKWKWEKEGDWIYRKIRGLSTNVLPQTDEELATQSVINEMRNLIVEPLSTL
ENNITKAKTGIEFAMALYHYLEQVKAVEHLESWRQVAEENGYLELAREHEQAWSSISELL
DEFVEVLGEEELDVNSFSEIITTGLDALEFSLLPPSLDQVVLADMENAKLLNMKVIFAIG
MNDGVMPLRQKDKGILSDQDRDSLRVENSNLKPSAKNNIGEEDLLAYKIMSLPSDKLFLS
YPAADEEGKVLSESNYLRKIKGQFKNLNESVYLTDPSLLNDKEQSSYIRSKQATLGLLTS
QLQMYKRGYPLSNVWWDAYNSYFEDSKESEAAKQVLSSLYYENKTKPLQETTAKNLFGEN
IHASVSRMEKFFSCEFQHFAQYGLKLEERAHYKLQAVDMGEIFHGAMEWISAELKRTNRD
WGNLTEEECRQMAKLAMTFLAPKIQHEILLSSKRMEYIQYKLLQIITRATTVLNEQAKSS
AFRPIGLEVDFGLKGDIPPLKIPLQSDSELLLQGRIDRIDAAEQDDRTFLRIIDYKSSSH
DLALTEVYYGLALQMLTYLDIVVTNAQKMIGKTAEPAGVLYFHMHNQYVQAEKELSDEAI
ARELQKSSKMKGLILSDPVAVSLMDTNLEKGKSSNIIPAEIKQNGELSARSRTATKAEFD
KMRRFVRQKYQEAGNKILDGAVSINPYKLKEKTPCQFCGFRSFCGFDPSLASNQYRHLTN
EKTETILTKMDIEGGTQ
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgacacttcaaataattgctggtaaagcaggaacaggtaaaaccactcatttgatggat
gaagtaggcgaaaaaatcaaaaaaacttctaagacgtatatttttatcgtccccgatcaa
atgacgtttcaaatggaaacaagctttttaaataaacaaaacttggcagggatgctaggg
acacagattttcagttttagtaggcttgcttggaaaatacttcaagaaactggtggctta
tctaaaacttttttgagtcaaacaggtattgagatggttattcgaaaagctgctttagat
caaaaagataagttgaaaattttctctagagctacttcaaaaaaaggcttttattcagag
ctggctaagttattcaaagaaatgaaacaagaagaaatttctgtagacgaattagagaag
agtgcggcaaatttatctacaagtgtatctagcaaagtacatgacatttcacttatttat
caaaaatatgaagaattattagcaggaaaattccttgaaaatgaagattatttgagactg
ttagcagataagattattgagagtgattatttaaatcaaacggaaataattattgacgga
tttacttctttttcaaaacaagagttaacagtaatagaaaagctaatgcaaaaatgcgat
aaagtaacagtatcgttaactttaaacgtacctgaaatccataaaggtttggaagatttc
agtatgtttaaagcgagcactgaagcatactttgctttattagagatggctaaattaaat
aaaattcaagtggaaccggagaaaattcttttagaaaataaacgagctaactctgactca
ttagcctttttagccaacgcttggggagataataaatactcgtcatatgaagggggagca
aatgatttaaccatccatcaagctaataataggcgtgctgagatggaaggtgttgcccgc
gaaattcggcaattagcattaaacggctatagataccgagatatagcgattttgactaga
aacatcggtgattatgatattttatgtgaaacagtaatggagtcctttgatattcctatt
tttatagacaaaaaacgagcaatggctaaacacccatttattgaatttattcgttctagc
attgatgcaattttatttaattggaaatatgagccgattttccaagcagttaaaacagaa
tttttctttgatgtggctgaaaatgcgactattatgagaagaaaagcagatatacttgaa
aattatgtgctcgaaaatggtattcaaaataagtggaaatgggaaaaagaaggcgattgg
atttaccgtaaaattcgagggctttctaccaatgtcttgccacaaacagatgaagaatta
gcaacccaaagtgttattaatgaaatgaggaatcttatagttgagcctctttcaacatta
gaaaataatataacaaaagcaaaaacaggcatagagttcgccatggctctatatcattat
ttggagcaagttaaagctgtagaacatttagaatcatggagacaagtagcagaagaaaat
ggttatttggaacttgctagagaacatgaacaagcttggagttcaatatcagaactgcta
gatgaatttgtagaagttttaggtgaagaagaattagatgttaatagtttttctgaaata
attacgacgggcttggatgcgctagaattttctttactaccaccttctttagatcaagta
gttttagctgatatggaaaatgcaaagttgcttaacatgaaagttatttttgcgattgga
atgaatgatggcgtaatgccactacgtcaaaaagataaagggattttgtcagatcaagat
cgcgactctttgcgagtagaaaatagcaatttaaagccatctgctaaaaataacattggt
gaagaagatttattagcctataaaataatgagtttgccaagcgacaaattatttcttagt
tatccagctgcagatgaagaagggaaagttcttagtgagtcgaattatctaagaaaaata
aaaggccaattcaaaaatttaaatgaatcggtttatttaactgacccaagtttactgaat
gataaagaacaaagtagttatattcgttctaaacaagctacactgggcttattaacaagc
caattacaaatgtataaacgtggctatcctttatcaaatgtatggtgggatgcttataat
agttattttgaagatagcaaagaatctgaggcagcaaaacaagtactttcaagcctttat
tatgaaaataaaaccaaaccactccaagaaacaactgctaaaaacctatttggtgaaaat
attcatgcgagtgtttcgcggatggagaagttttttagttgtgagtttcaacactttgcg
caatatggcttgaaattagaagaaagagctcattataagctacaagctgtagacatggga
gaaattttccacggggcgatggaatggatttccgctgaattaaaacgaactaaccgagat
tggggtaatttaacggaagaagaatgtaggcaaatggctaaacttgcgatgacattttta
gctccgaagattcaacatgaaattttattaagttcaaaacggatggaatatattcaatat
aaattactccaaattattacaagagctactacggttttaaatgaacaagcgaaaagcagt
gcgtttcgtccaattggtttagaagtggattttggtttgaaaggagatattccgccttta
aaaattccattacaatcagatagcgaacttcttttacaaggacgtattgatagaattgat
gcagctgaacaagatgatcgtactttccttcgaatcattgattataaatctagttcacat
gatttggctcttactgaagtttattacgggttggctcttcaaatgctgacttacttagac
atcgttgtaacaaatgcgcaaaaaatgataggcaaaactgctgagcctgctggggttctg
tactttcatatgcataatcaatatgtccaagcagagaaagaattgagtgatgaagcaatt
gctcgagaactgcaaaaaagttccaaaatgaaaggcttaattttatcggatcctgtggct
gtttcgcttatggatacaaatctggaaaaaggaaagtcttccaatattattccagctgaa
attaagcaaaacggtgagctaagtgcgcgttccagaactgcgacaaaagcagagtttgat
aaaatgcgccgatttgtaagacaaaaatatcaggaagcaggaaataaaatactagatgga
gctgtttccattaatccttataaattaaaagaaaaaacaccttgtcagttttgtggattt
cgctcgttttgtggatttgatccatccttagcgagtaatcaatatagacatttaacaaat
gaaaaaacagaaacaattttaacaaaaatggatatagaaggagggacgcagtag
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