Listeria innocua (serotype 6a): lin0400
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Entry
lin0400 CDS
T00067
Name
(GenBank) similar to B. subtilis transcription repressor of myo-inositol catabolism operon IolR
KO
K06608
DeoR family transcriptional regulator, myo-inositol catabolism operon repressor
Organism
lin
Listeria innocua (serotype 6a)
Brite
KEGG Orthology (KO) [BR:
lin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lin03000
]
lin0400
Transcription factors [BR:
lin03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
lin0400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
FeoC
HTH_20
MarR
HTH_36
SpoIIID
HTH_Mga
HTH_24
DUF4004
REC1
PuR_N
Mga
E3_UFM1_ligase
HTH_7
PqqD
DUF4250
GntR
HTH_PafC
Motif
Other DBs
NCBI-ProteinID:
CAC95633
Pasteur:
LIN00400
UniProt:
Q92EQ8
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All DBs
Position
complement(411681..412442)
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AA seq
253 aa
AA seq
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MKVQRIQAIENLIHEKGSASLDDLCKQFNVSKNTIRRDIAKLLQKNTIKKVYGGVVSIYN
NPEEIRPFENRDTENHAEKQLIGKAAADFIEENDLIFIDSGTTTSCLAAALPTDKEITII
TNSLDVINFASEMDNVKLIVIGSTFKTSTKSFVGVENWGFFEKYNITKAFMAATALSTTH
GVMNSDILEYEIKRHMMEKAREKFLLVDHTKVDKSALLTYGELAEFDWLVTSKEMAGGCL
GYCADVGVLVRLV
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtacaacgcattcaagcgatagagaatttaattcacgaaaaaggcagcgctagc
ctcgatgatttatgcaaacaattcaacgtttctaaaaatactattcgtcgcgacattgcc
aaacttctccaaaaaaacaccatcaaaaaagtctatggtggtgtcgtttctatttataat
aatcctgaagaaattcggccgttcgaaaatcgtgatacagaaaatcatgctgaaaaacag
cttatcggaaaagcagcagctgattttattgaagagaatgatttgatttttattgattcc
gggacaacgactagctgtctcgctgcggctctgccaacggataaggagattactattatt
acgaacagcctagatgtgattaattttgcgagtgaaatggataatgtgaaattaattgtg
attggctcgacttttaaaacgagtactaaatcatttgttggcgtggagaactgggggttt
tttgagaaatacaatattacaaaagctttcatggccgcgactgcactttcgactacgcat
ggggtgatgaactcggatattttggagtatgagattaagcgccatatgatggaaaaagcc
agggagaaatttttgctggtggatcatacaaaggtggataaatcggcgttgcttacgtac
ggggagctggcggaatttgattggttggttacgtcgaaggaaatggctggtgggtgtttg
gggtattgtgcggatgttggggttttggtgaggttggtttag
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