Listeria innocua (serotype 6a): lin0408
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Entry
lin0408 CDS
T00067
Name
(GenBank) similar to uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
lin
Listeria innocua (serotype 6a)
Pathway
lin03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
lin0408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lin03400
]
lin0408
Enzymes [BR:
lin01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
lin0408
DNA repair and recombination proteins [BR:
lin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
lin0408
Prokaryotic type
lin0408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
MMS21_N
Motif
Other DBs
NCBI-ProteinID:
CAC95641
Pasteur:
LIN00408
UniProt:
Q92EQ0
LinkDB
All DBs
Position
420093..420758
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AA seq
221 aa
AA seq
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MVKTWDEFLEQEAKQPYFIELMKAVSEAREEGNVYPSEEDMFSCFRLCPYDKVKVVILGQ
DPYHGPGQAHGLSFSVQKDVRIPPSLRNIYKELKSDLDIDPANHGYLAKWAEQGVLLMNT
SWSVEEGKAGSHKKLGWATFTDHVLEELNNYDKPLVFILWGNHAIKAASGITNPKHLLIK
GVHPSPLAASRGFFGSKPFSKTNEFLKENNRTPIDWDLNSK
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaaacttgggatgaatttttagagcaagaagccaaacagccttattttatagaa
ttgatgaaagctgtgagtgaagcgagagaagaaggaaatgtttatccatcagaggaagat
atgttttcgtgtttccgcttatgcccttatgataaagtcaaagttgtcatccttggtcaa
gacccttatcatggcccaggtcaggcacatggcttaagtttttctgtgcaaaaagacgtt
cgaatcccgccaagccttcgaaatatttacaaggaactaaaaagcgacttggatattgat
ccagctaatcacggttatcttgctaaatgggcggaacagggagttttactaatgaacaca
agctggagtgtggaggaagggaaagccggaagccacaaaaaattaggttgggcgacattt
accgaccacgttttagaagaattaaataattacgataagccgctcgtctttattttatgg
gggaatcacgccataaaagctgcaagtggcatcactaacccaaaacatttactgattaaa
ggagtacatccatcaccccttgccgcaagtcgtggctttttcggaagtaaaccattttcc
aaaaccaatgagttcttaaaagagaataatagaacgccaattgattgggatttaaatagt
aaataa
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