Listeria innocua (serotype 6a): lin1190
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Entry
lin1190 CDS
T00067
Name
(GenBank) similar to uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
lin
Listeria innocua (serotype 6a)
Pathway
lin03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
lin1190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lin03400
]
lin1190
Enzymes [BR:
lin01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
lin1190
DNA repair and recombination proteins [BR:
lin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
lin1190
Prokaryotic type
lin1190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
CAC96421
Pasteur:
LIN01190
UniProt:
Q92CI1
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All DBs
Position
1203555..1204229
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AA seq
224 aa
AA seq
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MIKLENDWDELLKDEFNQPYYLKLRQFLKNEYQTKRIFPDMYDIFNALKHTAYKDVKVVI
LGQDPYHGPGQAHGLSFSVQKGVQIPPSLQNIYLELHNDLNCEIPNNGYLIPWADQGVLL
LNTVLTVRAGQANSHRGQGWELLTNRIIEMINQKEEPVVFLLWGNNAKEKLQLLTNPKHI
AFTSVHPSPLSASRGFMGCKHFSKTNHFLEQNGIKPIDWQIPSI
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgataaaactcgaaaatgactgggatgagttattaaaagatgagtttaaccagccatac
tatttaaaacttcgccagttcctaaaaaatgaataccaaaccaaaagaatatttcctgat
atgtatgatatttttaatgctttaaaacacacggcttataaagatgtaaaagtagttata
cttggtcaagatccataccacggaccaggacaagcacacggtctttctttttcagtccaa
aaaggtgttcaaattccaccatcgttacaaaatatttatttagaattacataacgatcta
aattgtgagattccaaacaatggctatttgataccatgggcggaccaaggagtgctcttg
ctaaacacagttcttaccgttcgcgccggtcaagctaattcgcaccgtggccaaggttgg
gaactgctaacaaaccgcattattgaaatgattaaccagaaagaagaacccgttgtcttt
ttactttggggaaacaatgcaaaagagaagttacaactactcacaaatccaaaacacatt
gctttcacatccgttcatcctagcccactatcagcttcacgcggctttatgggatgcaaa
catttttcaaaaacaaatcacttcctagagcaaaatggcatcaaaccaattgattggcaa
attccttctatataa
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