Listeria innocua (serotype 6a): lin1400
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Entry
lin1400 CDS
T00067
Name
(GenBank) similar to geranyltranstransferase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
lin
Listeria innocua (serotype 6a)
Pathway
lin00900
Terpenoid backbone biosynthesis
lin01100
Metabolic pathways
lin01110
Biosynthesis of secondary metabolites
Module
lin_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
lin00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
lin1400
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
lin01006
]
lin1400
Enzymes [BR:
lin01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
lin1400
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
lin1400
2.5.1.29 geranylgeranyl diphosphate synthase
lin1400
Prenyltransferases [BR:
lin01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
lin1400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
CAC96631
Pasteur:
LIN01400
UniProt:
Q92BZ1
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All DBs
Position
1392721..1393602
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AA seq
293 aa
AA seq
DB search
MQDLMLFLDHYKKVLDESLFKEINMRNIEPKLKESMLYSVQAGGKRIRPMLVFATLQALN
IEPMRGLKTATALEMIHTYSLIHDDLPAMDDDDYRRGKWTNHKIYGDATAILAGDALLTL
AFSILAEDENLSFETRIALINQISYSSGAEGMVGGQQADMEAENKQVTLEELASIHARKT
GELLIFAVTSAAKIAEATPEQTKRLRIFAENIGIGFQISDDILDVIGDETKMGKKTGVDA
FLNKSTYPGLLTLEGAKRALNEHVSIAKSALSGHDFDDEILLKLADLIALREN
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
ttgcaagatttgatgctttttctagatcattataaaaaagtacttgatgagtcgcttttt
aaagaaataaatatgcgcaatatcgaacctaagttgaaagaatcaatgttatattcagtg
caagctggcggaaaacgaattcgtccaatgcttgtttttgcaacgcttcaagccttaaat
attgagccaatgcgcggtttaaaaacagctacggcacttgaaatgattcatacgtacagc
ttaattcacgatgatttaccagcaatggatgatgatgactatcgacgcgggaaatggacg
aaccataaaatatacggtgatgcaacagcaattttagcaggagatgctttgttaacactc
gctttttctattttagctgaagatgaaaatctatctttcgaaacgcgtattgctttaatt
aatcaaattagttatagcagtggagcagaaggcatggtaggtgggcaacaagccgatatg
gaagctgaaaataaacaagtcacattagaagaactagcatcaatccacgctcgcaaaact
ggtgaactattaattttcgcagtaacctcagccgcaaaaatcgctgaagcaactccagaa
caaacaaaacgattacgaatttttgcagaaaatatcggcattggttttcaaattagcgac
gatattttagatgtaattggcgatgaaacaaaaatgggtaaaaagacaggggtcgacgct
tttctgaataaaagtacctatcccggattactcacactcgaaggtgctaaacgggcatta
aatgagcatgtttcaattgcaaagtcagcgctttcaggacatgatttcgacgatgaaatt
ctccttaaacttgctgatttaatcgcacttagagaaaattaa
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