Listeria innocua (serotype 6a): lin2888
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Entry
lin2888 CDS
T00067
Name
(GenBank) similar to ABC transporter (ATP-binding protein)
KO
K18104
ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:
7.6.2.2
]
Organism
lin
Listeria innocua (serotype 6a)
Pathway
lin01501
beta-Lactam resistance
lin02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lin00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
lin2888
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
lin2888
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lin02000
]
lin2888
01504 Antimicrobial resistance genes [BR:
lin01504
]
lin2888
Enzymes [BR:
lin01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
lin2888
Transporters [BR:
lin02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
lin2888
Antimicrobial resistance genes [BR:
lin01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AbcA [MD:
M00700
]
lin2888
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA
RsgA_GTPase
AAA_29
AAA_22
ABC_membrane_3
AAA_28
Motif
Other DBs
NCBI-ProteinID:
CAC98114
Pasteur:
LIN02888
UniProt:
Q927A1
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All DBs
Position
2900941..2902668
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AA seq
575 aa
AA seq
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MDQKKYSWRNFFQLIISAKPANWIIFCALIASVVTTVAGLVVPLFTKNLIDGFSIASLDV
KMVALIVLAFILQAITNGFSIFLLNYMGQKVVATIRERLWRKIVHLPVSYFDNTKTGEMV
SRMVNDTVVVKELIADHLPQFVTGIISVVGAIIILFFMDWKMTLIILIAVPITALVVAPL
GQKMFKISKGLQNETADFTGSISQTLSEARLVKASNAETRETEAGHKGINRLFGFGIREA
KVVAVLGPLIFFVVMGVIVGIIGYGGIRVSAGTMTTGTLIAFLLYLFQIIVPVTSFATFF
AQLQKAKGATERIADILNEAEEDFDAGKKVDVSGKTIRATDISFSYNEGEPILKDVSFDT
KPGEVIAFAGPSGGGKSTLFAILERFYQPKTGEILVGDIPLSEISINSWRSQIGYVSQES
AMLSGTIRDNLCYGLDREINEEELWNVAKLAYADGFISELPDKMATEVGERGVKLSGGQR
QRIAIARAFLRNPNILMLDEATASLDSQSEQIVQQALANLMEGRTTFVIAHRLSTIVNAD
QILFIEHGEITGRGTHSELVASHPLYASFAEQQLK
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggatcagaaaaaatatagttggcggaattttttccagttaattattagtgcaaaacct
gcaaattggataatattctgcgctttaatcgccagtgtcgtaactactgttgctggcctt
gtagtcccactttttacaaaaaacttaattgatggcttttcgatagcttcgttagatgta
aaaatggtggctttgattgttcttgcatttattttgcaagctataacaaacggtttctcg
attttcttgcttaattatatgggtcagaaagttgtagctaccatccgcgaacgtttatgg
cgaaaaatcgtgcacttgccagtttcctattttgataatacaaaaacgggtgaaatggtg
agccgcatggtgaacgatacagtcgtagtcaaagaactaattgccgatcatttaccgcaa
tttgtaacagggattatttctgtggttggtgcgattattatcctattctttatggactgg
aaaatgacactaattatcttaatagctgttccgattacagcgctagtcgttgcgccgctt
ggtcagaaaatgtttaaaatctctaaaggtcttcaaaatgaaacagctgacttcactggt
tctattagtcaaaccctttctgaagcgagactcgtaaaggcatctaacgctgagacacgt
gaaacggaagctggtcataaaggaatcaatcgtctattcggattcggtattcgtgaggcg
aaagttgttgctgtacttggacctttaattttctttgttgtaatgggagttattgttggt
atcattggttacggcgggattcgagtttcagccgggactatgactactggtacattaatc
gcattcttgttatatctattccaaattatcgtcccagtaacctcttttgcaacgttcttc
gcgcaacttcaaaaagcaaagggagcgacagaacgcattgcagatattttaaatgaagca
gaagaagatttcgatgctggtaaaaaagtagatgtgagcggaaaaacgattcgcgccact
gatatttccttctcttacaatgaaggtgaaccgattttaaaagatgtttcttttgataca
aaaccaggggaagttatcgcattcgctggtccaagtggtggcggtaaatctaccttgttt
gcgattttagagcgtttctatcaaccgaaaacgggagaaattttagtgggtgatattcct
ctttctgagatttctattaactcatggcgctcacaaatcggttacgtttcacaggaaagt
gctatgctttcaggcaccattcgcgataatctttgttacggactggaccgagaaattaac
gaagaagagctttggaatgtagcaaaactggcttatgcagacggctttatttctgaactt
cctgacaaaatggcaaccgaagtcggcgaacgtggtgtgaagctctcaggaggccaaaga
caacggattgcaattgcacgagctttcttacgtaacccgaatattctcatgttagacgaa
gcgacagcaagcttagatagtcaatccgaacaaatagttcaacaagctttagccaacttg
atggaggggcgcactacttttgttattgctcaccgtctttccactattgttaatgccgac
caaattctctttattgaacacggggaaataactggtcggggcacacatagcgaattagtg
gcttctcatccgctttacgcttcttttgcggaacaacaattaaaataa
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