Listeria innocua (serotype 6a): pcrA
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Entry
pcrA CDS
T00067
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lin
Listeria innocua (serotype 6a)
Pathway
lin03420
Nucleotide excision repair
lin03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
pcrA
03430 Mismatch repair
pcrA
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lin03400
]
pcrA
Enzymes [BR:
lin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
pcrA
DNA repair and recombination proteins [BR:
lin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
pcrA
MMR (mismatch excision repair)
Other MMR factors
pcrA
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
HHH_3
ResIII
AAA_22
DUF6990
Motif
Other DBs
NCBI-ProteinID:
CAC97101
Pasteur:
LIN01871
UniProt:
Q92AP9
LinkDB
All DBs
Position
complement(1884471..1886666)
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AA seq
731 aa
AA seq
DB search
MNAKELVDGLNPEQRKAVESTEGPLLIMAGAGSGKTRVLTHRIAYLVRERGVNPYNILAI
TFTNKAAREMKSRIGNLMGGEAESIWISTFHSMCVRILRRDIDRIGYERNFTILDGSDQL
SVIKGILKEKNVDPKKFEPRGILASISNAKNELITASEYIKEASGFYDKMVGEVYEKYEK
KLKKNQALDFDDLIMVTIQLFERVPDVLEYYQRKFQYIHVDEYQDTNHAQYLLVKLLASR
FKNLCVVGDSDQSIYGWRGADISNIMSFEKDYPSAKTILLEENYRSTKRILEAANRVIEN
NGNRKPKNLWTSNAEGKKIFYHKALTEKEEAAYVVMKIQEEVNNSSRPLSDFAILYRTNA
QSRVMEEYFMKSNMAYTMVGGTKFYDRKEIKDILAYLRLISNNEDDISLTRIINVPKRGV
GPGTLEKLNNVAAAYDLSLFEVLNRIELAGISAKISKDLVAFHDLVRGFTQMQDFLSVTE
LVEEILEKTGYRAMLKNERTIEAQTRLENIDEFLSVTQNFEKENDDKTLLAFLTDLALVA
DVDKLEEDNEEQNGAVTLMTLHSAKGLEFPVVFLVGMEEGIFPHSRAIYEEEEMEEERRL
AYVGITRAEEELFLTSAYSRMLYGRPSSNQESRFIGEIPRDLLELGNENKLTADKPYAKP
RMPQKATTAYKSSGAETLGWTVGDKASHKKWGVGTVVSVKGEGSGMELDIAFPSPTGVKR
LLAEFAPIEKV
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
ttgaatgcaaaagaattagttgacggattaaacccagaacaacgaaaagcagtagaaagt
acagaaggacctttattaattatggctggtgcagggagtggtaaaacacgtgttttaacc
catcgcatcgcttatttagtaagagaacgtggcgtgaatccttataatattttagcgatt
acgtttaccaataaagcagcgcgtgaaatgaaatcacggattggtaatttaatgggcgga
gaagcggaatcaatttggatttccacttttcactccatgtgcgtaagaattttacgtcgt
gatatagaccggattggctacgaacgcaattttactattttagacggaagtgaccaatta
tcggttattaaaggcattttaaaagaaaaaaatgtcgaccctaagaagtttgagccacga
ggtattttggcttctattagcaatgcaaaaaacgaacttataactgcaagcgaatatata
aaagaagcaagtggtttctacgataaaatggtcggcgaagtctatgaaaaatatgaaaag
aaactgaagaaaaatcaagcgctcgattttgatgatttaattatggtgacgattcaatta
tttgaacgtgttccagatgttttagaatattatcagcgcaagtttcaatacattcacgtg
gatgagtaccaagataccaaccacgcgcagtacttacttgtaaaactacttgcctctaga
tttaagaatttatgtgtcgttggtgactctgaccaatcaatctacggctggcgcggggca
gatattagtaatattatgtctttcgaaaaagattacccaagtgccaaaaccattttacta
gaagagaattaccgttcgaccaaacgtattttagaagcggcgaaccgtgtaatcgaaaat
aacggcaatcgtaaaccaaaaaatctttggactagtaatgcggaagggaagaagattttt
taccataaggcgttaactgagaaagaagaagcggcttacgtcgttatgaaaattcaagaa
gaagtaaataattcgagtcgtcctctttctgattttgcgattctttatagaaccaatgcc
cagtcccgtgtaatggaagaatatttcatgaagtcaaatatggcttacacaatggtcggc
ggtacgaaattctatgatagaaaagaaattaaagacattttggcttatttacgacttatt
agtaataatgaagatgatattagtctgacacgtatcatcaacgtaccaaaacgcggagtt
ggaccaggcacattagaaaaactaaacaatgttgccgcagcttacgatttaagtttgttt
gaagtacttaatcgcattgaattagccgggatttctgctaaaataagcaaagatttagtt
gctttccatgatttggttcgcggattcacccaaatgcaagatttcctatctgtaactgaa
cttgtagaagaaattctcgaaaaaacaggttaccgagcaatgctgaaaaacgaacgaact
attgaagctcaaactcgcttagaaaatatcgatgagtttttatctgttacacaaaacttt
gaaaaagaaaatgacgataaaacattactcgcatttttaacggatttagcactggttgct
gacgtcgataagttagaagaagataatgaagaacaaaacggtgcggtgacgctgatgacg
cttcactctgccaaagggctagaattcccagttgtctttttagttgggatggaagaagga
attttcccacattctagagccatttatgaagaagaagaaatggaagaagaacgccgcctt
gcttacgttggtatcactcgtgcagaagaagaacttttcctaacgagcgcgtattcccgg
atgctttatggtcgtccatcatccaaccaagaatctcgctttattggggaaattcctcgt
gacttactagaattaggcaacgaaaataaattaacagctgataaaccgtatgccaaaccg
cgcatgccgcaaaaagcaactactgcctataaatcttctggagcggaaacactcggttgg
acagtcggcgataaagctagtcataagaaatggggcgtaggaacagtcgtaagtgtcaaa
ggagaaggtagcggaatggaacttgatattgcattcccaagcccaactggagtcaaacga
ttgctcgcagaatttgcgccaattgaaaaagtataa
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