KEGG   Listeria innocua (serotype 6a): polA
Entry
polA              CDS       T00067                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
lin  Listeria innocua (serotype 6a)
Pathway
lin03030  DNA replication
lin03410  Base excision repair
lin03420  Nucleotide excision repair
lin03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lin00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    polA
   03410 Base excision repair
    polA
   03420 Nucleotide excision repair
    polA
   03440 Homologous recombination
    polA
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lin03032]
    polA
   03400 DNA repair and recombination proteins [BR:lin03400]
    polA
Enzymes [BR:lin01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     polA
DNA replication proteins [BR:lin03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     polA
DNA repair and recombination proteins [BR:lin03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     polA
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     polA
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_polI_exo1 5_3_exonuc HHH_5 Enkurin LTD NYN_YacP FeoB_N HHH_2
Other DBs
NCBI-ProteinID: CAC96831
Pasteur: LIN01600
UniProt: Q92BF0
LinkDB
Position
complement(1606292..1608919)
AA seq 875 aa
MNKLVLIDGNSIANRAFYALPLLNNDKGVYTNAVYGFAMMLMNVLEKEKPSHVLVAFDAG
KTTFRHTTFKGYKGGRQKTPSELSEQFPFIRELLTAYDIPQYELANYEADDIIGTLTKKA
EADGMEVAIITGDRDLTQLASRKTTVYITKKGIADMETNTPETLKEKYDLTPSQIIDMKG
LMGDSSDNIPGIPGVGEKTALKLLHEFGGTVESVLEHAEEISGKKLKEKVLENKELAILS
KELATINVDSPIECTVESTKYDGYQTEKVIPLLKEMNFTTLLKNIEGDTAEEAKELKELS
FEIVTELKEQHFGGKTALYVELENDNYHTANFIGLTVHSSQGTYFFTKETAEKSAVFRNW
VESDETKVVYDAKKTMVAMNRIGFAIKGVTFDIMLASYLLNPSDSIDDFTSVAVRHDYTE
VETDEAIYGKGAKRSTPEENIVAAHLARKAVAIAELEKRLVDDLEENEQLALMEDLELPL
TFVLAQMEMQGVSVDTKRLENMKVELAGRLKTLEESIHSLAGEEFNINSPKQLGVILFEK
LELPPVKKTKTGYSTAADVLESLSGKHAIIDEILLYRQLGKIQSTYIEGLLKVTDKETHK
VHTRFNQTLTQTGRLSSVDPNLQNIPIRLEEGRKIRQVFVPSKPGWKMFSADYSQVELRV
LAHISEDENLIYAFKHDYDIHTKTAMDVFHVEQDEVDSLMRRQAKAVNFGIVYGISDYGL
SQNLGITRKEAKDFIDRYFVSYPAVKEYMQDIVRFAKEKGYVETILHRRRYIPEIVSRNF
NVRGFAERTAMNTPIQGSAADIIKKAMILMSERLKSENLEAKLLLQVHDELIFEAPEAEI
AKLEEIVPDVMENAVELSVPLKVDSAFGDTWYDAK
NT seq 2628 nt   +upstreamnt  +downstreamnt
gtgaataaattagttttaattgatggaaatagtattgcgaatcgcgcgttttatgcgttg
ccgctcttaaataatgataaaggcgtatatacaaatgcggtgtacggatttgcaatgatg
ctgatgaacgtacttgaaaaagaaaagcctagtcatgtgctcgttgcttttgatgcagga
aaaacaaccttccgccacactacatttaaaggatataaaggtggtcgccaaaaaacgcca
agtgaattatccgagcaatttccatttatccgagagctcttaacagcttacgatatcccg
caatatgaacttgctaactacgaggccgatgatattatcgggacgttaacgaaaaaagca
gaagcagacggaatggaagtcgctatcataacaggagaccgcgatttaactcaacttgct
tctcggaaaaccactgtttatattactaaaaaaggtatagctgatatggaaacaaacact
ccagaaaccttaaaagaaaaatatgacttaacaccatcgcaaatcattgatatgaaaggt
ttaatgggagattcatctgataatattcccggcattcctggcgtaggtgaaaaaacagcc
ttgaaacttttgcatgaatttggcggtacagttgaaagtgtccttgaacatgctgaagaa
atttcaggtaaaaaattaaaagaaaaagtactagaaaataaagaattagctattttaagt
aaagaacttgcgacaatcaatgtagattcaccaattgaatgtacagtcgaaagtacgaaa
tatgatggctatcaaacagaaaaagtcatcccactattaaaagaaatgaacttcacaacg
cttttaaaaaacatcgaaggagatacagcggaagaagcaaaagaattaaaagaactatct
tttgaaatagtaacggaattaaaagaacaacactttggcgggaaaaccgcgctttatgtg
gaactggaaaatgataattatcataccgcaaactttattggattaaccgttcattctagc
caagggacatacttctttacgaaggaaactgcagaaaaaagtgcggttttccgtaattgg
gtggaaagtgacgaaacaaaagtcgtttatgatgcgaaaaaaacaatggtagcgatgaac
cgaattggttttgctataaaaggtgtcacttttgatattatgttagcttcttatttacta
aatccatcagattccattgatgactttacaagtgttgctgtgagacatgattatacagaa
gtagaaacagacgaagcaatttatggaaaaggtgctaaacgaagcacgccggaagagaac
attgttgctgcccacttagccagaaaagcagtagcaattgctgaattagagaaaagatta
gtagatgatttagaggaaaatgagcaattagctttgatggaagatttagagttaccactg
acatttgtcttggcacaaatggaaatgcaaggggttagcgtagatacaaaacgcttagaa
aatatgaaagtagaattagctggtagattgaaaacattagaagaatcgattcattcacta
gctggcgaagaatttaacatcaattcaccaaaacaattaggtgtcattttatttgaaaaa
ctagaacttcctccagtgaaaaaaaccaagactggttattcaaccgcagcggatgtacta
gagagcttatcaggaaaacatgcgattattgatgaaattttattatatcgtcaacttggt
aaaattcaatctacctacattgaaggcttgcttaaagtaactgacaaagaaacgcataaa
gtacacacgcgtttcaaccaaacgttaacgcaaactggtcgtttaagttctgttgatccg
aacttacaaaacatcccgattcgacttgaagaaggccggaaaatcagacaagttttcgta
ccaagtaaacctggttggaaaatgttttccgccgattactcccaagtagaattgcgtgtt
ttagcgcatatttctgaagacgagaatttaatttatgcgtttaaacacgactatgatatt
catacaaaaacagcgatggatgttttccatgtagaacaagatgaagttgattctttaatg
cgtcgtcaagccaaagcagtaaactttggaatcgtatacggcattagtgattatgggctt
tctcaaaaccttggtatcacgagaaaagaagcgaaagactttattgatcgttattttgtg
agttatccagctgtaaaagaatatatgcaagatattgttcgttttgcgaaagaaaaaggc
tacgtagaaactattttacatcgtcgtcggtatattccggaaatcgtcagccgcaatttc
aatgtaagaggatttgcggaaagaacggcaatgaatacacctattcagggtagtgccgcg
gatattataaaaaaagcaatgattctcatgagcgaacgcttaaaatctgagaatttagaa
gcaaaattattacttcaagtgcacgatgagcttatctttgaagcacctgaagcagaaatt
gcaaaattagaagagattgtacctgatgtaatggaaaatgcggtagaactttctgtgcca
cttaaagttgatagcgcatttggcgacacttggtatgatgcgaaataa

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