Listeria innocua (serotype 6a): sbcC
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Entry
sbcC CDS
T00067
Name
(GenBank) similar to ATP-dependent dsDNA exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
lin
Listeria innocua (serotype 6a)
Brite
KEGG Orthology (KO) [BR:
lin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lin03400
]
sbcC
DNA repair and recombination proteins [BR:
lin03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
sbcC
Archaeal homologous recombinant proteins
sbcC
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_29
AAA_21
SMC_N
ABC_tran
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
CAC96917
Pasteur:
LIN01686
UniProt:
Q92B64
LinkDB
All DBs
Position
complement(1700147..1703218)
Genome browser
AA seq
1023 aa
AA seq
DB search
MRPIKLTMQAFGAYAKKEVIDFEKLGTEQIFVISGKTGAGKSTIFDAISFAIFGKANTFD
RESFSMRSHFATDKEITEVTLVFRLKDKIYQISRIPQQEIAKQRGNGTTTSPQKAELYEL
IGDEMKLLASSVSDVNTKMEELIQLNVDQFRQILMIPQGEFRELLVSDSKEKEVILQRLA
HTVYYEKVENLLWEKQKEAEILVVEARKKVAELAELSLPGIEITGKTTTEISLLQTEAIK
QEQAILAELESALSIIRKETSEAVEKVTLAKEQLLDWQNLDLYIEEVAKLEAEKDFYQVI
ANRIEAAKRASNLRSQDALCIRLKEQLETAVNTEKQVAHEVELITNQFSNAKKQKEALAE
QEAVLEANKRTLFQLEEMEPKIIELETVTIQKRRAEINWKEAADRLEKVMKTEQEIAAEL
QSMETRLGEINQAELAILEAINKRTTAEALIEKNQELVNKRMKMDLWNKQKQTEEQTLKQ
LLTEKLAIETMIKQEESNLQQEQAATLAAHLHEGDACPVCGSVSHPQLAEYGESASLTTL
EEAKAKLHEKQLAINEVEKSISQLEWQLAEWADIADVDLVAVEKLLAENRQLAKNLTDQI
NQLQTNVAQKENIQGALETLKNKQKELETEKNNTALQVESFHQEVQLSSGKLSYLEQAIP
ADLRDKTIFDKKKNELSNSIKTHLEQAEQVDKIFREAEKETTRLESTLQSAENTTLDAKE
ALQVQREVFKESMKQNDFPTYEAYKQALMSVEELKSKEEQLADFERKRHLAISRQADLTE
KLKNKQKPNIEQLESFMTEKQLELAQSEENTIKQRDFVLKRKELAENYQNSIQAVEKAEE
NYADIGLLADSARGKNARRLTFERYILAMFLDTIIHRANHRLSKMTSGRFELKRKIEKAK
GNVQSGLELEVFDEYTGLTRHVKTLSGGESFKTSLALALSLAEVVQEMAGGISLETMFID
EGFGTLDPESLEVAVECLLETQENGRLVGIISHVPELKERISARLEVTATNHGSTTKFIT
ANS
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgagaccgataaaattaactatgcaagcttttggagcttatgccaaaaaagaagtaatt
gactttgaaaaactaggaacggaacaaattttcgtgatttctggtaaaacaggggcgggg
aaatccactatttttgatgcaattagctttgcgatttttggaaaagcaaacacattcgat
cgggaaagtttttccatgcgcagccattttgcgacggacaaagaaataacggaagtaacg
cttgtgtttagattgaaagacaaaatttatcagatcagtcgtattcctcaacaagaaatt
gctaaacaacgaggaaatggaacgacaacttctcctcaaaaagctgaattatacgaactc
ataggtgatgaaatgaagctccttgcgagttccgttagtgatgttaatacgaaaatggaa
gaattaattcaacttaatgtggatcaatttagacaaattttaatgattcctcaaggggaa
tttagagaactactcgtatcggatagtaaagaaaaagaagtgattttgcaacgattagcg
cataccgtgtactatgaaaaagttgaaaatttgctgtgggaaaaacaaaaagaagcagaa
attttagttgtcgaagcgagaaaaaaagtcgccgagcttgccgaactcagcttgccagga
atagaaataaccggcaagacaacaactgaaattagtttgctgcaaacagaagctatcaag
caagaacaagcaattttagcagagttagaaagtgctttaagcatcattcgtaaagaaaca
agtgaagcggttgaaaaagtgactcttgcgaaagaacaactgcttgattggcaaaattta
gatttatatatagaagaagtagctaaattagaagctgaaaaagatttttatcaagtgata
gcaaaccgaattgaagcagctaaaagagccagtaacctgcgttctcaggatgcgctttgt
atccgtttaaaagaacaattagaaacagcagtaaatactgaaaaacaagtagcgcatgaa
gtagagttgataacaaaccaattttcaaatgcaaaaaaacaaaaagaagcactcgccgaa
caagaagcagtactagaagctaacaaacgcacactttttcaattagaagaaatggaacca
aaaatcattgaattagaaacagtaacgattcaaaaaagacgcgcagaaattaattggaaa
gaagcagcggatcgtttagaaaaagtgatgaaaacagagcaggaaatcgcagcagaacta
cagtcaatggaaactcgtttaggagaaattaaccaagcagaactagcgattttagaggct
attaataaacgaacaactgccgaagctctcattgaaaaaaatcaagaacttgttaataaa
cgaatgaaaatggatctatggaataaacaaaaacaaacagaagaacaaacgctaaaacaa
cttttaacagaaaaattagctatagaaacaatgattaaacaagaagaatcaaatttacaa
caagaacaagctgcaacactcgcagctcatttgcacgagggtgacgcttgtcctgtctgc
ggatctgtgtcacatccacaattggcagaatacggggaatcagccagcctcacaacgcta
gaagaggcaaaagctaaactacatgaaaaacaattagcgattaatgaggttgaaaaatca
atcagccaacttgaatggcaattagctgaatgggcggatatagcagatgtggacttagtt
gcagtagaaaagttattagcagaaaaccgccaattagctaaaaacctaacagatcaaata
aatcaattgcaaactaacgtggcgcaaaaagaaaatattcaaggcgcacttgaaacatta
aaaaacaaacaaaaagagctagaaacagaaaaaaataatacggctcttcaagtagaaagt
tttcatcaagaagtccaactctcatctggaaaactaagctatttagaacaagcaattcca
gccgatttacgagataaaactatttttgataagaaaaagaatgaattaagtaacagcatt
aaaacgcatctggaacaagccgaacaagtggataaaatatttagagaagctgaaaaagaa
acaactaggctggaatcaacattgcaatctgccgagaacacaacactggacgctaaagaa
gcattacaagtccaacgcgaagtttttaaagagtcaatgaaacaaaatgattttcctact
tatgaggcttataaacaagctttaatgtcagtagaagaactaaaaagtaaagaagaacaa
ctagctgactttgagcggaaacgccatttagctatatcacgccaagctgatttaacagaa
aaactgaaaaacaaacaaaaaccaaatatcgaacaactagaatcatttatgaccgaaaaa
caattagaacttgctcagtcagaagaaaacacaattaaacaacgcgactttgttttgaaa
cgaaaagaacttgccgaaaactatcaaaacagtattcaagcagtagaaaaagcagaagaa
aattatgcggacattggcttattagcagactcagctcgtggtaaaaatgctagaaggcta
acatttgaacgttatattttagcgatgtttttagatactattatccaccgagctaatcat
cgtttatctaaaatgactagcggacgttttgaactcaagcgaaaaatcgaaaaagcaaaa
gggaatgtccaaagtgggttagaacttgaagtttttgatgaatatacggggctgacgcgt
catgtaaaaacactttcaggtggagaaagctttaaaacctcgctagcacttgctttgtcg
cttgcagaagttgtccaagaaatggctggtggaatttcactggaaaccatgtttattgat
gaaggatttggaacgcttgatccagagtcattagaggtcgccgtagaatgtttactggaa
acacaagaaaacggccgcttagtcgggattatttcccatgtgccagagctaaaagaacgc
atttcagcaaggttagaagtaactgcaactaatcacggaagtacaactaaatttattact
gctaatagctaa
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