Listeria innocua (serotype 6a): smc
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Entry
smc CDS
T00067
Name
(GenBank) similar to Smc protein essential for chromosome condensation and partition
KO
K03529
chromosome segregation protein
Organism
lin
Listeria innocua (serotype 6a)
Brite
KEGG Orthology (KO) [BR:
lin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lin03036
]
smc
Chromosome and associated proteins [BR:
lin03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
smc
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_23
AAA_29
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
CAC97148
Pasteur:
LIN01918
UniProt:
Q92AK4
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Position
complement(1930960..1934520)
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AA seq
1186 aa
AA seq
DB search
MLLKRLEMNGFKSFADKVAIDFVPGMTAVVGPNGSGKSNITEAIRWVLGEQSAKSLRGGR
MGDVIFAGSDTRKPINFAEVSLILENEDHFLPLDYSEVAVTRRIYRNGDSEFLINKENCR
LKDIVDLFMDSGLGRESFSIISQGKIDEILNSKPEERRSIFEEAAGVLKYKHRKKQAENK
LFETEENLNRVQDILYELEGQLEPLEMQASIAKDYLFQQEELEKYEVTLLASEISSLTEK
LAEVRKEFGENQTVLIKLREELHAEEAIVSREKQALNETDIALDNLQERLLVETEKLEQL
EGERNLQLERKKHSSENEQVYAETLAAITEKITALEEQREVLSSSKLEKQTALEIAVKAK
KELEATLSKYDDLSEEAIENRKSDYIDLRHTQTTINNDLGYIERQIGQITSRIDKLDLEN
SQHVDERKDMLAQIDTTKTHLTKIQSELTEQMEIYREVQQTLAKQEAVFGTQERALYKHY
ETVQQMKSRKETLEELADDYAGFFQGVREVLKAKKEIPGIHGALVELIDIPAKYQQAMET
ALGASAQNVVVEDDRVAREAISFLKKTKSGRATFLPLSTIQPRELPAATKNALSNQPAFI
ALASEVISFDQKVSPVILNALGTTILAKDLKGANTLARLVNFRYRIVTLEGDVVNAGGSM
TGGATKGGKSSILTRKHELGQLAEKIAELNNSTRELESAVQVAKDSMSKKREELEETRVI
GENLRLQEKELLGKLDRETENLERFNKQLQLYDIEKADGSEELNKLLERKETLLQEQVEI
AKQIEKTDEEIKAMTSSSKALESKRTADLESLSSLKAQIAAKREQLQSAVEAVDRVTTTL
HENYEQKEAAEQKLASLKTNLSSVHTSEESARKSIEELRKDKAETSEKLNQTRQTRTELQ
EKIELLEAELTQKNNQISFYVEQKNNAEISIGRLEVDITNRIDRLQEAYLLTPEQAEEKI
LPEVDTEQARSKVRLLKRSIDELGIVNIGAIEEFDRIQERFDFLTGQQADLLAAKETLFK
VMDEMDEEMKIRFSESFEAIKTEFAIVFPELFGGGSAELVLLDPENLLTTGIDIVVQPPG
KKLQNLSLRSGGERALTAIALLFAIIRVRPVPFCILDEVEAALDEANVTRFSRYLKQFES
GTQFIVITHRKGTMEEADVLYGVTMQESGVSKLVSVRLEETAELIK
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atgttattaaaacgattagaaatgaatggctttaaatcctttgctgacaaagttgcgata
gatttcgtgcccggcatgactgcagttgtagggccaaatggtagcgggaaaagtaatatt
acagaagcaatccgctgggtacttggtgagcagtccgctaaatcgctccgtggtggccga
atgggcgacgttatttttgctggaagtgatacgcgtaaaccaattaattttgcagaagta
tcgcttattctcgaaaatgaagaccattttttaccacttgattatagcgaagtagctgta
actagacgtatttaccgtaatggtgatagtgaatttttaatcaataaagaaaattgtcga
ctgaaagatattgtcgatttatttatggattctggacttgggagagagtctttttcgatt
atttcgcaagggaaaattgatgaaattctgaacagtaagccagaagaacgccgctcgatt
tttgaagaagcagccggcgtacttaaatacaaacatcgtaaaaaacaagctgaaaataaa
ttatttgaaaccgaagaaaatttaaatcgtgtacaagatattttatatgaattagaaggg
caactggagccgctcgaaatgcaagcttctattgccaaggattatttattccaacaagaa
gagctagaaaaatacgaagtgacgttacttgcgagtgaaatcagttctttaacagaaaaa
ctagctgaagtccgtaaagagtttggtgaaaatcaaacggttttaattaagctacgcgaa
gaattacatgcggaagaagcaattgtttcccgtgaaaaacaagcgcttaatgaaactgat
attgcgctagataatttacaagagcgtttgttagtagaaaccgaaaaactcgaacaacta
gaaggagagcggaatcttcaattagaacgtaaaaaacatagcagtgaaaatgaacaagtc
tacgcagaaacattggctgcaattacggaaaaaattactgctcttgaagaacaaagagaa
gtgttaagtagttcaaaactcgaaaaacaaacggcgcttgaaattgccgtaaaagcgaaa
aaagaactagaagcgacactttcaaaatatgatgatttatccgaagaagcgattgaaaac
cgtaaaagtgattatattgatttacgccatacacaaacgacaatcaataatgatttaggg
tatatcgaacgccaaatcggacaaattactagccgaattgataaattagatttagaaaat
agtcaacatgtcgatgaaagaaaagatatgttagctcaaattgatacaacaaaaacgcac
cttacaaaaatccaaagcgagctcacagaacaaatggaaatataccgtgaagtgcagcaa
acattggcaaaacaagaagctgtttttggaacacaagaacgtgcgctttataaacattat
gaaacagtccaacaaatgaaatcacggaaagaaacattagaagaattggcagatgattat
gctggatttttccaaggtgtacgtgaagtattaaaagcaaaaaaagaaattcctggcata
cacggagctttagtagaacttattgacataccagcaaaatatcaacaagcaatggaaaca
gcgctcggagcaagtgcgcaaaatgtcgttgttgaagatgaccgagttgctcgtgaagca
atcagctttttaaagaaaacgaaaagcggtcgcgcaacatttttaccactttcaactatt
caacctcgagaattaccagcagcaactaaaaacgctttaagtaatcaaccagctttcatc
gcacttgctagcgaagtgatttcatttgaccaaaaagtgtctccagtgattttaaacgcg
ctcggtacaacgattttagcgaaagatttaaaaggggcgaatacgctcgctcgtttagta
aacttcaggtatcgcattgtgacacttgaaggtgatgtggttaatgccggtggttcaatg
actggtggagcaacaaaaggcggcaaatcgtctatcttaacgagaaaacacgaattaggt
caattagcagaaaaaatcgctgaattaaataattccactcgtgaactcgagtctgctgtt
caagttgccaaagatagcatgtcgaaaaaacgagaagaacttgaagaaactcgtgttatt
ggtgaaaatttacgtttacaagaaaaagaattgcttggtaaattagatcgcgaaaccgaa
aatctagaacgttttaacaaacaattacagctatatgatattgaaaaagcagatggcagc
gaagaattaaacaaactgctggaacgaaaagaaacgctacttcaagagcaagtagaaatc
gctaaacaaatcgaaaaaaccgacgaagaaataaaagcgatgacatcttcaagtaaagca
ctagaaagtaaacgtacagcagatttagaaagcttgtcgtccttaaaagcgcaaattgcc
gctaaacgtgagcagttacagtctgccgtcgaagcagtagaccgcgtaacaacgacatta
catgaaaactacgaacaaaaagaagcagctgagcaaaaactcgcttccttaaaaacaaat
ctttcaagtgttcatacaagtgaagaatctgctagaaaatccatcgaagaacttcgtaaa
gataaggccgaaacgagtgaaaaactaaatcaaacaagacaaactcgcaccgaactacaa
gaaaaaatcgaactactagaagctgagttgacgcaaaaaaataaccaaattagtttttat
gtggaacaaaaaaataatgcggaaataagtattggtcgtcttgaagtagatattactaac
cgaatcgatcgcttgcaagaagcctatttactaacaccagaacaagccgaagaaaaaatc
ttaccagaagtagatacggaacaagcacgttctaaagttcgtttattaaaacgttcgata
gacgagctcggaatcgttaatattggcgctattgaagaatttgatcgcatccaagaacgc
tttgactttttaacaggacaacaagcggatttacttgccgcaaaagaaaccctctttaaa
gttatggacgaaatggatgaagaaatgaaaattcgtttcagtgagagttttgaagcaata
aaaacagaatttgccattgttttcccagaattatttggcggaggaagtgcggaactcgta
ctacttgatccagagaatctactaacgacagggattgacatcgtcgttcaaccaccaggg
aaaaaactacaaaacttatcgcttcgttctggcggagagcgtgcattaactgcgattgca
ttactttttgctatcattcgtgttcgaccagtaccattctgtattttggatgaagtagag
gcggccttagatgaagccaatgttacacgttttagccgctacttaaaacaatttgagtca
ggcactcagtttatcgttattacgcaccgaaaaggaacaatggaagaagccgacgtactc
tacggtgtcacaatgcaagagtccggcgtctccaaattagtttcggttcgcttagaagaa
acagccgaactcattaaataa
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