KEGG   Listeria innocua (serotype 6a): topA
Entry
topA              CDS       T00067                                 
Name
(GenBank) highly similar to DNA topoisomerase I TopA
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
lin  Listeria innocua (serotype 6a)
Brite
KEGG Orthology (KO) [BR:lin00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lin03032]
    topA
   03400 DNA repair and recombination proteins [BR:lin03400]
    topA
Enzymes [BR:lin01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     topA
DNA replication proteins [BR:lin03032]
 Prokaryotic type
  DNA Topoisomerases
   topA
DNA repair and recombination proteins [BR:lin03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      topA
SSDB
Motif
Pfam: Topoisom_bac Zn_ribbon_Top1 Toprim Toprim_4 Lar_restr_allev JHBP DUF2996 Zn_ribbon_4 Toprim_2 Toprim_3 HypA
Other DBs
NCBI-ProteinID: CAC96545
Pasteur: LIN01314
UniProt: Q92C77
LinkDB
Position
1307376..1309454
AA seq 692 aa
MADYLVIVESPAKAKTIEKYLGKKFKVKASMGHVRDLPKSQMGVDTEHDYEPRYITIRGK
GPVLKDLKQAAKKAKKVYLAADPDREGEAIAWHLANSLDLDQSDKLRVVFNEITKEAVKE
SFKTPRKIDMDLVNAQQARRILDRLVGYNISPILWKKVKKGLSAGRVQSIALRIIIDREK
EINNFKPEEYWTIDGNFLKGKKKFQANFYGVNGKKRKLSTADDVKEVMSAIKGKTFDVTD
VTKKERLRNPAAPFTTSSLQQEAARKLNYRTRKTMMLAQQLYEGITLGKQGTVGLITYMR
TDSTRIADSAILEASNYIKETYGAEFSRNHKRSDKNAKGAQDAHEAIRPTSAMRSPQEVK
EYLTRDQLRLYRLIWERFIASQMTPAVLDTMRVDLDNNGVNFRANGSKIKFHGFMKVYVE
SNDDNTEEKENILPDLKKGDKVQSESLEQRQHFTQPPPRYTEARLVKTLEEIGIGRPSTY
SPTLDTIQRRNYVSLTNKRFVPTELGEIVNEMIEEYFPEILDVKFTANMESELDEVEHGE
VEWVKVIDEFYKQFEPNVIKADAEMEKIEIKDEPAGIDCDLCGAPMVYKMGKYGKFLACS
RFPDCRNTKAIVKEIGVTCPKCEKGHVIERKSKKKRIFYGCDRYPDCDYVSWDKPVERAC
PKCNKRALVEKKLKKGVQVQCTNCDYKESTQQ
NT seq 2079 nt   +upstreamnt  +downstreamnt
atggcagattatttagtgattgtagagtcacctgcaaaagcaaaaacaattgaaaagtat
ttaggaaagaaatttaaagttaaagcttcgatgggacatgttagggatttaccaaagagt
cagatgggtgtagatactgaacatgactacgaacctcgttacattacgattcgcggaaaa
ggccctgttttgaaagatttaaaacaagcggctaaaaaagcgaaaaaagtctatctcgca
gccgatccagatcgcgaaggagaagcaattgcatggcatttagccaatagtcttgattta
gatcaatcagataaattacgtgtggtgtttaatgaaattacaaaagaagctgtaaaagaa
tcattcaagacaccaagaaaaattgatatggaccttgtgaacgctcaacaagcacggagg
attttagaccgtttagtaggttataatatcagtcctatcttatggaagaaagttaaaaaa
ggtctaagtgcgggacgtgtgcaatcgattgcgctacgaattattattgatcgcgaaaaa
gaaataaataatttcaaaccagaagaatattggacaattgacgggaacttcctaaaaggt
aagaaaaaattccaagctaatttttatggcgtgaatggtaagaagagaaaactttccact
gctgatgacgtaaaagaagtaatgtcagcaattaaaggtaaaacatttgatgtaactgac
gtaactaaaaaagaaagacttagaaacccagcagcaccatttactacctcaagtttacaa
caagaagcagcacggaaattaaattatcgtactagaaaaacgatgatgcttgctcaacaa
ctatatgaaggaatcacacttggaaaacaaggtacagtaggtctaatcacatacatgcgt
actgactctactcgtattgcagattccgccattctagaagcaagtaattatattaaagaa
acatacggagctgaattttcccgtaatcataaacggtctgataaaaatgctaaaggcgca
caagatgcccatgaagcaatccgtccaacaagcgctatgagaagtcctcaagaagtgaaa
gaatatctaactcgagatcaacttcgattatatcgcttgatctgggaacgttttattgct
agccaaatgacaccagctgtcctagatacaatgcgagttgatttggataataatggtgtt
aactttagagcaaacggatcgaaaatcaaattccatggttttatgaaagtctatgttgaa
agtaacgatgataatacggaagaaaaagaaaatattttaccggatttgaaaaaaggagac
aaggtgcagtccgaatcactcgaacagcgtcaacatttcacacagccacctccacgttac
acagaagctagattagtaaaaacacttgaagaaattggtattggtcgaccatcgacgtat
tcaccgacattagatacaatccagcgtagaaattatgtttcgctaacaaataaacgtttt
gttccaactgaacttggtgaaatcgtcaatgaaatgattgaggaatatttccctgaaatt
ttagatgtgaagttcactgctaatatggaaagcgaattagatgaagtggagcacggtgaa
gttgaatgggtcaaagttatcgatgagttttataaacaatttgaaccaaacgttattaaa
gctgatgccgaaatggaaaaaatcgaaattaaagatgaaccagccggtatcgattgtgac
ctatgcggggcaccaatggtatacaaaatgggtaaatatggtaagtttcttgcgtgcagc
agatttccagattgccgaaatacaaaagcaatcgttaaagaaatcggcgtgacttgtccg
aaatgtgaaaaaggacatgtaatagaaagaaaaagcaagaaaaaacgtattttctacgga
tgtgatcgctatccagattgtgattacgtttcttgggataaaccagtcgaaagagcttgc
ccgaaatgtaataagcgtgcattagtagagaagaaattgaaaaaaggcgtacaagtacaa
tgtacaaattgtgattataaagaatccacacaacaataa

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