Listeria innocua (serotype 6a): uvrB
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Entry
uvrB CDS
T00067
Name
(GenBank) excinuclease ABC (subunit B)
KO
K03702
excinuclease ABC subunit B
Organism
lin
Listeria innocua (serotype 6a)
Pathway
lin03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
uvrB
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lin03400
]
uvrB
DNA repair and recombination proteins [BR:
lin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
uvrB
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
uvrB
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
P-loop_SecA
AAA
HEM4
AAA_22
UB2H
AAA_30
AAA_7
AAA_19
DUF87
AAA_5
PMT2_N
DUF5662
Motif
Other DBs
NCBI-ProteinID:
CAC97859
Pasteur:
LIN02632
UniProt:
Q928A4
LinkDB
All DBs
Position
complement(2649945..2651921)
Genome browser
AA seq
658 aa
AA seq
DB search
MKDKFELVSKYSPQGDQPRAIEQLVAGLKKGLKHQTLLGATGTGKTFTVSNVIQEVNKPT
LVMAHNKTLAGQLYSEFKEFFPNNAVEYFVSYYDYYQPEAYVPQSDTYIEKDASINDEID
KLRHSATAALFERRDVIIIASVSCIYGLGSPVEYGEMLVSLRVGMEISRDQLLRKLVDIQ
YDRNDIDFQRGRFRVRGDVVEIFPASRDEHCMRIEFFGDEIERIREVDALTGEIIGDREH
VSIFPASHFVTRPDIMKKAIVNIKAELEDRLKVLRAENKLLEAQRLEQRTNYDIEMMEEM
GYCSGIENYSRHLSLRPAGVTPYTLLDYFPDDFQIVIDESHVTMPQIRGMFNGDQARKQM
LVDHGFRLPSALDNRPLRLEEFEKHINQIMFISATPGPYELEKNPDVIEQIIRPTGLLDP
IVEIRPIQGQIDDLMDEINDRVEKNERVLITTLTKKMSEDLTNYLKEAGVKVQYLHSEVK
TLERIEIIRDLRLGVYDVIVGINLLREGIDLPEVSLVAILDADKEGFLRSERSLIQTMGR
AARNENGRVIMYADKMTDSMRNSISETERRRKIQIEYNEKHGITPKTIRKEIRGIIAATS
AADEREAIKQHDLSKMSKKERDIFIEGMEHEMKEAAKALDFERAAELRDALLEIKAEG
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
ttgaaggataaatttgagttagtttctaagtatagcccacaaggagaccaacctagagca
atagaacaattagttgcgggattaaaaaaaggcttaaaacaccaaaccttacttggggca
accggtacagggaaaacttttactgtatctaatgtaattcaagaagtaaataaaccaact
cttgttatggcacataataagacgctagcgggacaattatatagtgaattcaaagagttt
ttcccgaataatgcagtggaatactttgttagttactatgattattaccagccagaagct
tatgtaccgcagagtgatacctacattgaaaaagacgctagtatcaatgacgaaatagat
aagcttcgtcactccgctacagcagcactttttgaacgtagagatgtaattattatcgcc
agtgtatcttgtatttatggtttaggttcgccggtcgaatacggagaaatgctagtttcg
cttcgggtaggcatggagattagccgagaccaattgttacgcaagctggttgatattcaa
tatgaccgaaatgatattgattttcagcgcggtcgttttcgtgtccgcggagatgtggtc
gaaattttcccggcatctagagatgaacactgtatgagaattgaattttttggcgacgaa
attgaacgtattagggaagtagatgcccttactggagaaatcataggcgacagagaacac
gtttctattttcccagcatctcactttgttactagaccagatattatgaaaaaagcaatt
gttaatataaaagcagaacttgaagaccgccttaaagtcttaagagcagaaaataaacta
ctggaagcacagcgtcttgaacagagaaccaattacgatatagaaatgatggaagaaatg
ggttattgttcaggtattgaaaactattcaagacatttatcactacgtccagcgggagta
actccatatacattgctagattatttcccagatgatttccaaatagttattgatgaatca
catgtaacgatgcctcaaattcgtggcatgttcaacggggaccaagccagaaagcaaatg
ctagtcgatcatggttttaggttgccaagcgcacttgataaccgtccacttcgattagaa
gaatttgaaaagcatattaatcaaattatgtttatctctgcaaccccaggcccatacgaa
ttagaaaagaatccagatgtaattgaacaaatcattcgacctaccggactactagatcca
attgtcgaaatacgtcctatccaaggtcagatagatgatttaatggatgaaatcaatgat
cgagttgagaagaacgaacgagttctaatcactactttaacgaaaaaaatgtcggaggat
ttgacgaattacctaaaagaagccggcgtaaaagttcaatatttacattctgaggtaaaa
acattagagcgaattgaaattattcgtgaccttcgattaggggtatacgatgttattgtt
gggattaacttactccgtgaaggaatcgatttaccagaggtgtccttggtagcaatttta
gatgccgataaagaaggtttcttacgttcagaacgttccttaatccaaacgatgggacga
gctgcccgtaatgaaaatggacgagtaattatgtacgcagataaaatgacagattccatg
cgcaattcgattagtgaaactgaacgtcgtcgtaaaatccaaattgaatataacgaaaaa
catggcatcacaccaaaaacaattagaaaagaaattcgtggcattatcgcagcaacttct
gccgcagatgaacgagaagcaataaaacaacatgatttaagtaaaatgtctaagaaagaa
cgagatattttcattgaaggtatggaacacgagatgaaagaagcagccaaagcacttgat
ttcgaacgtgcagctgaacttcgtgatgctttactggaaataaaagcggaaggatga
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