Leucobacter insecticola: G7067_05970
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Entry
G7067_05970 CDS
T07184
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
lins
Leucobacter insecticola
Pathway
lins03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lins00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
G7067_05970 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lins03021
]
G7067_05970 (rpoC)
03400 DNA repair and recombination proteins [BR:
lins03400
]
G7067_05970 (rpoC)
Enzymes [BR:
lins01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
G7067_05970 (rpoC)
Transcription machinery [BR:
lins03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
G7067_05970 (rpoC)
DNA repair and recombination proteins [BR:
lins03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
G7067_05970 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
QIM16065
UniProt:
A0A6G8FI69
LinkDB
All DBs
Position
1314643..1318536
Genome browser
AA seq
1297 aa
AA seq
DB search
MLEGTDFNELQIRLATAEDIRSWSFGEVKKPETINYRTLKPEKDGLFGEQIFGPSRDWEC
ACGKYKRVRYKGIVCERCGVEVTKSSVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDM
APKDLEKVIYFAAYMIIDIDEEGRHEDLAELEAELRLELKALEEQRDLGIAKRQQQAEAD
LAALEAEGAKADQRRRAEASAEKEMAAIRKEKDEEIARLQRVWEDFRNLKVGDLKPEDAV
FADLMDRYGDYFEAYMGAEAIKRRLEAFDLEAESEILHHQISEGKGQKKIRAIKRLKVVS
SFLQTGASPAAMVLDVVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLRRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGTGNRALKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVIKRLMDLSHAQNVKAAKRMVERAR
SEVWDVLEEIIRERPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCTAFNADFDGDQ
MAVHLPLSVEAQAEARVLMLASNNILKPSDGRPVTLPSQDMIIGLHFITTVKPDGIGTGR
AFGSVAEAILAMDEGTLDLGSKVKIRLEGYTNAEGVTSEKPVLVETTLGRALFNETLPND
YAYFERVADKNSLSSLVNDLAERYPKVEVAATLDRIKDAGFYWASRSGITVALSDVVTPP
NKAEIIAEHEKRATKVQRDYDRGMIQDSERHKALVEIWTEATDEVAAAMRESFTDENTIH
RMVSSGARGNWLQIRNIAGMRGLVSNPKGEIIPRPIINSYREGLSVAEYFIATHGARKGL
ADTALRTADSGYLTRRLVDVSQDVIIREEDCGTKRGLDLPIAEIDANGVLVGDENVENSV
YARTLSSDAVDANGVTIAQAGEDVGDVLIEKLFAAGITEIKVRSVLTCESAVGVCATCYG
RSLATGQRVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGSASADDITQGLPRVQELFEAR
TPKGASPIAEAAGRVTIEDTPKGRVILLTPDDGTEEKAYPVLKRATLIVEDGDHVELGQP
FLQGTLDPKDILQVGSTRGDKHIPGERAVQRYLVEGVQNVYRSQGVPIHDKHIEVIVRQM
LRKVTVVDHGETELLPGELVDRAKYQRINREALLEGKRVATARAEVMGITKASLATESWL
SAASFQETTRVLTQAAMEGSKDPLIGLKENVIIGKLIPAGTGLGVYRDVDVQATEEAKAE
RYPNRLFATEGTFDENDLSFVDFESFTADEFNPGNYS
NT seq
3894 nt
NT seq
+upstream
nt +downstream
nt
ttgctcgagggcacagatttcaacgagttgcagatccgtctggctacggccgaagacatc
cgcagctggtcgttcggcgaggttaagaagccggagaccatcaactaccgcaccctgaag
ccagaaaaggacggcctgttcggcgaacagatcttcggaccgagccgcgactgggagtgc
gcgtgcggcaaatacaagcgcgtccgttacaagggcatcgtgtgcgagcgctgcggcgtc
gaggtcaccaagtcctctgtacgtcgtgagcggatgggccacatcgagctcgccgcaccc
gtcacgcacatctggtacttcaagggcgtgccgtcacgcctgggctacctgctcgacatg
gcaccgaaggacctcgaaaaggtcatctacttcgccgcctacatgatcattgacattgat
gaagagggacgtcacgaggacctcgccgagttggaagccgagcttcgtctcgagctgaag
gctctcgaggagcagcgcgacctcggtatcgcgaagcgccagcagcaggcagaagccgac
ctagccgcgcttgaggctgagggtgcgaaggcggatcagcgccgtcgtgccgaagcctcc
gccgaaaaggagatggccgcgatccgcaaggagaaggacgaggaaatcgcccgtctccag
cgcgtctgggaagatttccgcaacctgaaggtgggcgacctgaagcccgaagacgctgtc
ttcgcggatctcatggaccgctacggcgattacttcgaggcctacatgggcgcggaggcg
attaagcgtcgcctcgaggccttcgaccttgaggcagagagcgaaatcctgcaccatcag
atctctgagggtaagggccagaagaagatccgcgcgattaagcgcctgaaggtcgtcagt
tccttcctgcagaccggcgcaagcccagccgcgatggtgctcgacgtcgtgccggtgatc
ccgccggaactgcgcccgatggtgcagctcgacggtggccgcttcgcgacctccgatctc
aacgatctctaccgccgtgtgatcaaccgaaacaaccgtctgcgtcgtctgcttgatctc
ggggcgcctgagatcatcgtgaacaacgagaagcgcatgctgcaggaggccgtcgacgcg
ctgttcgacaacggccgtcgtggtcgcccagtcacgggcaccggtaaccgggctctgaag
tcattgagcgacatgctcaagggcaagcagggccgtttccgtcagaacctgctcggtaag
cgtgttgactactcgggccgttcagtgattgtggtcggtccgcagctgaagctgcaccag
tgtggtctgcccaagcagatggcgcttgagctctttaagccgtttgtgatcaagcgcctc
atggatctgtcgcacgcgcagaacgtcaaggccgcaaagcgtatggttgagcgcgcacgc
tcagaggtgtgggacgtgctggaggagatcatccgcgagcgccccgtgctgctcaaccgt
gcaccgacgctccaccgcctcggcatccaggcgtttgaaccgcagctcgttgagggtaag
gctatccagctgcacccgctcgtctgcacggcgttcaacgctgacttcgacggtgaccag
atggcagttcacctgccgctatcggttgaggctcaggctgaagcgcgtgtgctgatgctt
gcttcgaacaacattctgaagccgtctgacggtcgcccggtgaccctgccttcacaggac
atgatcattggtctgcacttcatcaccacggtgaagcctgatggcatcggcactggccgc
gccttcggatctgtcgctgaagccatcctcgctatggacgagggcacgctggatctcggc
tccaaagtcaagatccgcctcgagggctacaccaatgctgagggtgtcacctcggagaag
cccgtgcttgtggagacgacactcggacgcgcgctcttcaatgagacgctgccgaacgac
tacgcctacttcgagcgtgtggcagacaagaacagtctgtcgagcttggtcaatgacctc
gctgaacgctacccgaaggtcgaagtcgccgcgacccttgaccggatcaaggacgcaggc
ttctactgggcatcacgctccggtattacggttgcgctgtcagatgtggtcaccccgccc
aacaaggcagagatcatcgctgagcacgagaagcgcgccaccaaggtgcagcgtgactat
gatcgcggcatgatccaggatagcgagcggcataaggcgcttgtcgagatctggaccgag
gcgaccgacgaggttgctgctgcgatgcgcgagtcgttcaccgacgagaacaccatccac
cggatggtctcctcgggtgctcgaggtaactggctgcagatccgcaatattgcgggcatg
cgaggcctggtgtcgaacccgaagggtgagatcatcccgcgtccgatcatcaactcgtac
cgcgagggcctgtcggtggcggagtacttcatcgcgacccacggtgcccgtaagggtctc
gccgataccgctctgcgtacggccgactcggggtacctgacccgtcgtctggttgacgtg
tcgcaggatgtcatcatccgcgaggaagactgtggcacgaagcgcggactagacctgccg
attgccgagattgacgccaatggcgtgcttgtcggcgacgagaatgtcgagaactcggtg
tacgcacgtacgctttcctctgacgcggtggacgccaacggcgtcaccatcgcgcaggcc
ggtgaagacgtgggtgacgtgctcatcgagaagctgtttgctgccggcatcacggagatc
aaggtccgttcggtcctgacctgcgagtccgctgttggcgtgtgcgcgacctgctacggc
cgctcgcttgctaccggccagcgcgtcgacatcggcgaggccgtcggcattatcgccgca
cagtcgattggtgagccgggaacccagctgacgatgcgtaccttccacaccggtggatcg
gcctcagccgacgacatcacgcaaggtctgccccgcgtgcaggagctcttcgaagcgcgt
acgcccaagggcgcatcgccgatcgcggaagctgccggtcgcgtcaccattgaagacacg
cctaagggccgcgttattctcctgacgccggacgacgggaccgaggagaaagcgtacccg
gtgctaaagcgtgccaccctgattgttgaagacggcgatcacgttgagctcggacagccg
ttcttgcagggcactctcgatccgaaggacatcctgcaggtcggttccacccgcggcgac
aagcacatccccggtgagcgtgccgtgcagcgctacctcgttgagggcgtgcagaatgtg
taccgatcgcagggcgtgccgatccacgacaaacacatcgaggtcatcgttcgccagatg
ctccgcaaggtcaccgtcgttgaccatggcgagaccgagctgcttccgggcgagctggtt
gaccgcgcgaagtaccagcgcatcaaccgtgaggcgctgctcgagggcaagcgggtcgca
acggctcgtgccgaggtgatggggatcacgaaggcgtcgctcgcgaccgaatcctggctg
tcggccgcctccttccaggagacgacccgtgtactcacccaggccgcgatggagggatcg
aaggatccgctcatcggtctcaaggagaatgtcatcatcggtaagctcatcccggccggt
accggtctgggcgtttaccgtgacgtcgatgtgcaggcgaccgaggaagcgaaggcggag
cgttacccgaaccgtctcttcgctaccgagggcaccttcgacgaaaacgatctctcgttc
gttgacttcgaaagcttcaccgctgacgaatttaacccgggcaactacagctag
DBGET
integrated database retrieval system
