Leucobacter insecticola: G7067_12380
Help
Entry
G7067_12380 CDS
T07184
Symbol
mfd
Name
(GenBank) transcription-repair coupling factor
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
lins
Leucobacter insecticola
Pathway
lins03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lins00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
G7067_12380 (mfd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lins03400
]
G7067_12380 (mfd)
Enzymes [BR:
lins01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G7067_12380 (mfd)
DNA repair and recombination proteins [BR:
lins03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
G7067_12380 (mfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
UvrB_inter
Helicase_C
TRCF
CarD_TRCF_RID
ResIII
Cas3-like_C_2
RecG_dom3_C
DUF3638
GpA_ATPase
Motif
Other DBs
NCBI-ProteinID:
QIM17023
UniProt:
A0A6G8FL63
LinkDB
All DBs
Position
complement(2636939..2640562)
Genome browser
AA seq
1207 aa
AA seq
DB search
MTLRGIDRLLEASSSFARALDASASDAEFSVAEGLRAPLIAGLLRRRREGGDRGPLLVIA
ATSREADALRTALASLIPEAVTAEFPAWETLPHERLSPSVETVGRRAAALRLLRDADPAR
PLILVASVRAALQPVSPHAVNARSIVLRGGDTAAPLEEISRGLVDLAYTRVDMVTRRGEF
AVRGGILDVFPPMAEQAVRVDFFGDEVDQIRRFAVSDQRSVGEPLPEVELWPARELLLTD
EVRERAAELLPRFPALGTLLEKMSQGMPVEGMESLLPQLVSGLQPLTALLPDGGAVLVAS
PERVASRAVSLADTNREFLEAAWQAATAGAEAPVPVEDSGLLSLTELRAASPGRPWWSVS
SFVRDEAAGDEAVIPHEPQAIAVHGGPVSKLSGAEATGAAIKLLSDRLAAGWHTIVTAQG
AGLVERARDVLAEAGAAARIVDELPERLDDGVIYLVTGTAWSGFESAEAKLLLATEAEFF
GRAVSSQAASGQKLAKRRGKNVVDPLKLVAGDFVVHETHGIGRFVELTQRMVPTGVGRDA
TKALREYLVLEYASSKRGMPKDKLYVPTDQLDQLSRYVGGEAPALSKMGGSDWANAKKKA
RKAVRDIAVELVKLYSARVASKGFAFSPDTPWQHELEEAFPYAETLDQLTTIDEVKRDME
RAIPMDRLIAGDVGFGKTEVAVRAAFKAVQDGKQVAMLVPTTLLVNQHFETFQDRFAGFP
VQLRPLSRFQSDKEAKETIEGLAAGTVDVVIGTHRLLAEGVLFKDLGLLIIDEEQRFGVE
HKDAMKKLKTNVDILAMSATPIPRTLEMAVTGIREMSTLATAPEDRHPILTFVGPRSDKQ
IGAAIRREMLREGQVFFVHNRVASISRVAAHIADLVPEARVAVAHGKLSEHQLEQVVQDF
WERKFDVLVSTTIIETGLDIANANTIIIDAADKYGLSQLHQLRGRVGRSRERAYAYFLYD
PDKPLTEHAHERLDTLAKNNELGSGMQVALKDLELRGAGNLLGGEQSGHIAGVGFDLYLR
MIGEAVSTFKGEDVQDNTELVLELPVDAHIPEEYVESDRLRLEAYQKFSAASHPQAPEDH
VTLVLEELTDRYGEPPAEVQRLAAISALRRRAARLGLTKVVAAGTVLRIEPVKLLDSRKM
RMNRMYPGSRYTEATQNLQIPLPGGTASSRSPLAGVGQRHVGDEGDIVAWTGRVLATLLE
EDAPAAE
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atgacacttcgcggaattgaccgtctacttgaggcttcctcatcgtttgcgcgagcgctc
gacgcgagcgcgagcgacgccgagttttcggttgccgagggactgcgtgcgccactgatc
gcggggctcctgcgccgccgtcgcgagggcggggatcgtgggccacttctcgtaattgct
gccaccagccgcgaggccgatgcgctgcgcacggctctcgcctcactgatcccagaagcg
gtgaccgcagagttccccgcgtgggagacgctgccacacgaacggctgagcccgagcgtc
gagacggtcggaagacgtgctgcggcgctgcgcttgctgcgtgacgccgatccagcgcgg
ccactgattctcgttgcctcggtgcgtgccgcactgcaaccggtgtcgccgcatgcagtt
aacgcccggtcgatcgtgctccgcggtggcgacacggcagcgccgctggaggagatctca
cgtggcctagtcgatctggcctacacccgcgtcgatatggtgaccaggcgcggcgagttc
gcggtgcgcggcggcattcttgacgtgtttcccccgatggcggagcaggccgtgcgggtt
gacttcttcggtgacgaggttgatcagatcaggcgcttcgcggtgtcggatcagcgtagt
gtcggagaaccgctgccagaggtcgaactgtggcccgcccgcgaactgctcctcacggac
gaggtgcgtgagcgggcggccgagttgctcccgcggttccccgcgctgggaacactgctt
gaaaaaatgagccagggcatgccggttgagggcatggagagtctgctgccgcagctggtg
tctgggctgcagcccttgaccgcgttgctgccggatggcggtgccgtgctcgtcgcttcg
ccggagcgcgtggcgagccgtgcggtgagcctcgccgacaccaaccgcgagttcttggag
gcggcgtggcaggcggcgaccgccggtgctgaggctccggttccggttgaggacagcgga
ctgttgtcgctgacggaactgcgtgctgcgtcacccggtcggccctggtggtcggtgtcg
agcttcgtgcgtgacgaggccgccggtgacgaggccgtgatcccgcatgagccccaagcc
atcgcggtgcatggcggccccgtctccaaactcagcggtgccgaagcgacgggtgccgcg
atcaagctcctgagtgaccgacttgccgcgggctggcacacgatcgtgaccgcgcagggt
gccgggcttgtcgagcgggcccgtgacgtcctcgccgaggctggcgctgcggctcgcatt
gttgacgaacttcccgagcgactcgatgacggcgtgatctacctggtcacgggcaccgcc
tggtccggctttgagagcgcggaagccaaactgctgctcgcgaccgaagcggagttcttc
gggcgagcagtgtcgagtcaggcggcgagcgggcagaagctcgcgaagcgacgcggcaag
aacgttgtcgatccgctgaagctggtcgcgggtgattttgtggtgcacgagacgcacggc
atcggccgcttcgttgagctgacgcagcgtatggtgccgaccggcgttgggagggacgcc
acgaaggcgctgcgtgaatacctggtgctcgagtatgcctcgagcaagcgcggcatgccc
aaagacaagctgtacgtgcccaccgatcagctcgaccagctgtcgcggtacgtcggcggt
gaggcccccgcgctctcgaagatgggcggcagcgactgggcgaacgcgaagaagaaggcg
cgcaaggccgtcagggacatcgcggttgaactcgtgaagctctactcagcgcgcgtcgcg
tcgaagggctttgcgttctcgcccgatacgccctggcagcacgaactcgaagaggcgttc
ccctacgccgagacgctcgatcagctgaccaccattgacgaggtgaaacgcgacatggag
cgggcgatcccgatggatcgcctgatcgcgggtgacgtcggcttcggcaagacggaggtc
gcggtgcgtgcggcgttcaaggcggtgcaagacgggaagcaggtggcgatgctcgtgccc
accaccctgcttgtgaaccagcactttgagacgtttcaggatcgattcgctgggttcccg
gtgcagctgcggccgctcagccgctttcagagcgacaaggaagcgaaggagacgattgag
ggtctcgccgcgggcacggtcgatgtggtgattggcacccatcggctgctcgccgagggt
gtgctgttcaaagacctcggtctgctcattattgacgaggaacagcggttcggcgtggaa
cacaaagacgccatgaagaagctgaagaccaacgttgatatcttggcgatgagcgcaacg
ccgatcccgcgcacgttggaaatggcggtcaccgggatccgtgagatgtccacgctcgcg
accgcccccgaggatcgccacccgatcctgacgtttgtgggtccgcgcagcgacaagcag
atcggggctgcgatccgccgcgagatgctgcgcgagggacaagtgttctttgtccacaac
cgggtggcgtcgatttctcgggtcgcggcgcacatcgcggatctggtgccagaggcgcgc
gttgcggtcgcccacggcaagctcagtgagcaccagcttgaacaggtggtgcaagacttt
tgggagcgtaagttcgacgtgctcgtgtcgaccacgatcatcgagacgggcctcgatatc
gccaacgcgaacacgatcatcatcgatgccgccgacaaatacggcttgagccaactgcac
caattgcgtggccgggtcggccgcagccgcgaacgggcctacgcctacttcctttacgat
cccgacaagcccctgaccgagcacgcgcacgagcggctggacacgctcgcgaagaataat
gagcttggctcgggcatgcaggtcgcgctgaaggatctcgaactgcgcggtgcgggcaac
ctgctcggcggcgagcagtccggccatatcgcgggcgtcgggttcgacctctatctgcgg
atgattggcgaggccgtcagcacctttaagggtgaggacgtgcaagacaacactgagctg
gtgctcgagttgcccgtcgacgcgcacatccccgaggagtacgtggagagcgatcgtctc
cggctcgaggcgtaccagaagttctctgcggcctcgcacccgcaggccccagaagatcac
gtcacgcttgtgctggaggaactcacggaccgctacggcgaaccccccgctgaggtgcag
cgactcgcggcgatctcggcgctgcgtcgccgtgccgcacgactcgggctcaccaaggta
gtcgcggccggcaccgtgctgcgcatcgagccggtgaagctgctcgactccagaaagatg
cggatgaaccggatgtaccccggatcccgctacaccgaagcgacgcagaacctacagatt
ccgctccccggcggcaccgcctcctcccgtagtccgctcgcaggggtggggcagcgtcac
gtcggagacgagggtgacattgtggcctggaccggccgggtgcttgcgaccctgctggag
gaagacgccccggcggcggagtag
DBGET
integrated database retrieval system
