Listeria ivanovii subsp. londoniensis WSLC 30151: JL53_01730
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Entry
JL53_01730 CDS
T03402
Name
(GenBank) RtcB protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
lio
Listeria ivanovii subsp. londoniensis WSLC 30151
Brite
KEGG Orthology (KO) [BR:
lio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lio03016
]
JL53_01730
Enzymes [BR:
lio01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
JL53_01730
Transfer RNA biogenesis [BR:
lio03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
JL53_01730
Prokaryotic type
tRNA splicing ligases
JL53_01730
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RtcB
SRP_TPR_like
Motif
Other DBs
NCBI-ProteinID:
AIS61520
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All DBs
Position
343460..344638
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AA seq
392 aa
AA seq
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MLTLKGKYNEAKVYTDNVDDNTIGQIITLCNQPFAKDSKIRIMPDTHGGKGCVIGTTMTI
QDKIVPNLVGVDIGCGLYVVKLKPGKLKMDFDKLDKVIRERVPSGSKTHDKPVDQFDLEG
VVAPIHLGWAARSVGTLGGGNHFIEVNQGSDGIYLVIHSGSRVLGKEIAKYHQEVAYKRL
DILRKELKLDAIAAKKRGNLEMANNLNGEREQVKLDYDLSYVTGSDLNNYLNDMEIAQKF
AARNRYIMAETILKAMKWNKAVVSAFDCVHNYIDIDNRMLRKGATSAQLGEQIIVPLNMR
DGSILATGKGNADWNYSAPHGAGRMLSRSKAKAQISLESYQAAMKDVWTTSVSKKTIDEA
PKAYKSAKQLLADVEDTMEIQEIIKPLYNFKA
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgctaacattaaaaggaaaatataacgaagcgaaagtttatacagataatgtggacgac
aataccatcgggcaaattattacgttgtgtaatcaaccgtttgcgaaggatagtaagatt
cggattatgcccgacacgcacggtggtaaaggttgtgtgattggaacgacaatgacaatt
caagataaaattgtaccgaatttggttggagtggacatcggttgtgggttgtatgtagtg
aagctaaaacctggcaagttaaaaatggattttgataagctggataaagttattcgcgaa
cgggtgccatctggaagcaaaacgcacgataagcctgtggatcaatttgatttggaaggt
gtagttgcgccaattcatctcggctgggcagctaggagtgtaggaacgcttggtggcggg
aaccattttattgaggtaaatcaaggttctgatggtatttaccttgtaatccacagtgga
agtcgggttctgggtaaagaaatcgcgaaatatcaccaagaagtagcttataaaagatta
gacatattgcgtaaagaattgaaattagatgcaattgctgcgaaaaaacgcggcaattta
gaaatggccaacaacttgaacggtgagcgcgagcaagtgaaattggattatgacttatct
tatgtgacgggctctgatttaaacaattatttaaatgacatggaaattgcacaaaaattt
gcagcgcgtaatcgttacatcatggcagaaactattttaaaagcgatgaagtggaataaa
gcagttgtttcggcgtttgattgtgtgcataattacattgatatcgacaaccgcatgctt
agaaaaggtgcgacatctgctcagcttggggaacaaattatcgtgccgcttaatatgcgc
gatggcagcattcttgcaactgggaaaggaaatgcagattggaattactcggcgccacac
ggggcaggcaggatgctaagtcgctccaaagcgaaagcgcaaatcagtttagaaagctat
caggcagcaatgaaagacgtttggactacttctgtttctaaaaaaacaattgatgaagcc
ccaaaagcctataaatcagctaaacaattacttgctgatgtagaagatacgatggagata
caagaaataattaaaccgttatacaatttcaaagcatga
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