Listeria ivanovii subsp. londoniensis WSLC 30151: JL53_07160
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Entry
JL53_07160 CDS
T03402
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lio
Listeria ivanovii subsp. londoniensis WSLC 30151
Brite
KEGG Orthology (KO) [BR:
lio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lio03032
]
JL53_07160
03400 DNA repair and recombination proteins [BR:
lio03400
]
JL53_07160
Enzymes [BR:
lio01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
JL53_07160
DNA replication proteins [BR:
lio03032
]
Prokaryotic type
DNA Topoisomerases
JL53_07160
DNA repair and recombination proteins [BR:
lio03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JL53_07160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Lar_restr_allev
JHBP
DUF2996
Toprim_2
Toprim_3
HypA
Motif
Other DBs
NCBI-ProteinID:
AIS62506
LinkDB
All DBs
Position
1452967..1455045
Genome browser
AA seq
692 aa
AA seq
DB search
MADYLVIVESPAKAKTIEKYLGKKFKVKASMGHVRDLPKSQMGVDTEHDYEPRYITIRGK
GPVLKELKQAAKKAKKVYLAADPDREGEAIAWHLANSLDLDQSDKLRVVFNEITKEAVKE
SFKTPRKIDMDLVNAQQARRILDRLVGYNISPILWKKVKKGLSAGRVQSIALRIIIDREK
EINNFKPEEYWTIDGNFLKGKKKFQANFYGVNGKKKKLSTADDVKEVMSAIRGKSFDVTD
VTKKERLRNPAAPFTTSSLQQEAARKLNYRTRKTMMLAQQLYEGITLGKQGTVGLITYMR
TDSTRIADSAILEAGNYIKETYGPEFSRNHKRSDKNAKGAQDAHEAIRPTSAMRSPQAVK
EYLTRDQLRLYRLIWERFIASQMTPAVLDTMRVDLDNNGVNFRANGSKIKFHGFMKVYVE
SNDDNTEEKENILPDLKKGDKVQSESLEQRQHFTQPPPRYTEARLVKTLEEIGIGRPSTY
SPTLDTIQRRNYVSLTNKRFIPTELGEIVNEMIEEYFPEILDVKFTANMESELDEVEHGQ
VEWVKVIDEFYKQFEPNVIKADAEMEKIEIKDEPAGIDCDLCGAPMVYKMGKYGKFLACS
RFPDCRNTKAIVKEIGVTCPKCEKGHVIERKSKKKRIFYGCDRYPDCDYVSWDKPVERAC
PKCNERALVEKKLKKGVQVQCTNCDYKESTQQ
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggcagattatttagtgattgtagagtcacctgcaaaagcaaaaacaattgaaaagtat
ttaggaaagaaatttaaagtgaaagcgtccatgggtcatgttagagacttaccaaaaagt
cagatgggtgttgatacagaacatgactatgaaccaaggtatatcactattcgtggtaaa
ggtcctgttttaaaagaattaaagcaagccgctaaaaaagcaaaaaaagtctatctcgcg
gccgatccagatcgcgaaggagaagcaattgcatggcatttggcgaacagtctagactta
gatcaatcagacaaattgcgagtggtatttaacgaaattacgaaagaggcagtaaaagaa
tcatttaaaactcctcgaaaaatagatatggacttagtaaatgcacagcaagctaggaga
atattggatcgtttagttggttacaatatcagcccgattttatggaaaaaagtaaaaaaa
ggcttgagtgcaggccgtgttcaatcaattgcacttcgaattatcattgacagagaaaaa
gaaatcaataatttcaaaccggaagaatattggacaattgatggtaatttccttaaaggt
aagaaaaaattccaagctaatttttatggcgtaaatggtaagaagaaaaagctttcaacc
gctgatgatgtaaaagaagttatgtccgcaattagagggaaatcattcgatgttacggat
gtaaccaaaaaagaacgacttagaaatccagctgcaccatttactacatctagtctacaa
caagaagcagcaaggaaattaaattatcgtacacgtaaaacaatgatgcttgctcaacaa
ttatatgaaggtattacgcttggaaaacaaggtactgttggattgataacctatatgcgt
actgactctactcgtattgcggattcagctattttagaagcaggtaattatattaaagaa
acatacggacctgaattttctcggaatcacaaacgttctgataaaaatgcaaaaggtgct
caagatgcccatgaagcaattcgtccaacaagtgcaatgagaagcccgcaagcagtgaaa
gaatatctgacgcgtgatcagcttcgcttgtaccgcttgatttgggaacgatttattgcc
agccaaatgacaccagctgttctggatacaatgcgtgttgatttagataataatggtgtg
aattttagagctaatggatcaaaaatcaagtttcatggctttatgaaagtttatgtagaa
agcaatgatgataatacggaagaaaaagagaatattttacctgatttgaaaaaaggcgat
aaggtacagtcggaatcacttgaacagcgccagcattttactcagccgcctccccgttat
acagaggcaagattagttaaaacactggaagaaataggaattggacgaccatctacctat
tcacctacattagatacaattcagcggagaaattatgtatccttgaccaataaacgtttc
attccaactgaattaggtgaaatcgtcaatgaaatgattgaagaatacttcccagaaatt
ttagatgtgaaattcacagctaatatggaaagcgagttagatgaagtagagcatggacaa
gtagaatgggtcaaagtaattgatgagttttataaacaattcgagccaaatgtgattaaa
gctgatgccgaaatggaaaaaattgaaattaaagatgaacctgctggtatcgactgtgat
ctttgcggagcgccaatggtatataaaatgggtaaatatggaaaattccttgcttgtagc
agattccctgattgccgaaataccaaagcgattgtaaaagaaattggtgttacttgtcct
aaatgcgagaaagggcatgttatcgaaagaaagagcaagaaaaaacgaattttttatggt
tgcgatcgctatccagattgtgattatgtttcatgggataaaccagtagaacgagcttgt
ccaaaatgtaatgaacgagcacttgtagaaaagaaactgaaaaaaggtgtacaagttcaa
tgtaccaactgcgattataaagaatcaacacaacaataa
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